Sphingobacterium sp. 21: Sph21_4798
Help
Entry
Sph21_4798 CDS
T01450
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shg02000
]
Sph21_4798
Transporters [BR:
shg02000
]
Other transporters
Pores ion channels [TC:
1
]
Sph21_4798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
DUF7382
MetallophosN
CooC_C
TTR_TEN1-4
Big_1
DUF6795
Dioxygenase_C
Motif
Other DBs
NCBI-ProteinID:
ADZ81305
UniProt:
F4C4Q6
LinkDB
All DBs
Position
complement(5704565..5707681)
Genome browser
AA seq
1038 aa
AA seq
DB search
MNSKNLWVKLCLAALPCVLHPALSTAAEGKGELVSAIGQQQRISGKVLDAAGQPLPGATV
RVKGGTAVTSTDVNGQFTLPAENGQQISVSFTGYLSTEITVTGNGNLVITLKEDAAALDE
VVVVGYSSQRRSSVTGAVASVNMTDVESRRVPNVAQSLQGQVAGVQITQSSGAPGDGINV
RIRGEGTIGNNNPLYVVDGVPSRDITFLNPSDIESMSVLKDASAAAIYGSRASAGVVVIT
TKQGKIGQSSININYFGGLQQATNLPKLLNTQQYLNVLEKAWNNSGIAGTNPYTADKSRT
DLANTDWLDELFETGKTNSVELSASGGTEKTQYLISGGYYRQNGIVIFDNDKYERINFRV
NVNSALSDRFKVGTNMQMTYSKRDQISAKGDAPGIIRHALLRPPLLSVYKDPSDPTWSAT
DPFTDLPFYRNNQVNTGYESNKYEYTRNPVAAAYFTDNVFSRIKTFGNVFGEYALLADKS
LKFRTNVGIDLNVNHTKAFFENYGDDDGSAGPNDLGKGRINRPEGLNEDRGTDFTLTWNN
VLSYDKTFGSHHISALAGTEYIKNNGASINGSRRRYDYTLPTFRYLDYGSTLLDVWNGGS
GSEYALFSIFGSASYEYEGKYMVTANLRADESSRFGENHRWGYFPSVSAGWTVSKEQFMQ
NVKWISDLRLRASTGTLGNQEIDNYAYLTLMKRVGENYLIDRYGNPDLKWETTVQHNIGL
DASFFGDHVSFSADYFIKDTRDILLPISLPSLVGNVQPTIVNAGQVKNKGFEFSLGYRNS
TAGGFRYGVNANLATLSNEVVKLHPNVPYISGTATRTQVGNPLNAYFGYVVEGIYQNQAE
VNSHLSGVSNPTQKPGDIRFKDLNGDGMINDQDRDFMGNPIPKLTYGLNLTAAYKGFDLA
VLIQGVQGVDRYNDGRKILDFDTRPFNYTTDVLGAWDGEGSSNTIPRVTFNDNGSSRVSS
IILEDASYARLKNVELGYSFGSLIKDTKVLKNMRVYVSGQNLLTWTDYKGLDPESTDLID
MGTYPSSRTFLFGINVTF
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaaaaacttatgggttaaactatgcctggctgcgcttccttgtgtactgcac
ccggcgctttcaaccgccgctgaggggaagggcgagcttgttagcgcaatcggacagcag
cagcgcattagtggaaaagtgctggatgctgccggtcaaccactgccaggggcaaccgtc
cgcgtaaagggcggaacggccgtaacatctaccgatgtgaacggacaatttaccttgccg
gctgaaaatggacagcaaatctccgtgtcctttacgggttacttatccaccgaaataacg
gttaccggcaacggcaatttggtgattaccttaaaggaggatgctgctgccctggatgag
gtagtggtggtaggttattcttctcagcggagatcttcggttaccggagctgtagcttcg
gttaatatgacggacgttgagtcgagacgggtgcctaatgtggcgcagtcgctacagggc
caggtggccggtgtgcaaattacgcaaagcagtggtgccccgggggacggcatcaatgtg
agaatccgtggcgaaggtaccattggcaataataacccgctttatgtggtagatggtgta
ccgtctagggatataacttttctgaatccttctgatattgagtcgatgtctgtactaaaa
gatgcttcggctgccgcaatctatggctcgcgggcgtcagcgggtgtggtggtgattacc
accaaacagggcaagatcgggcaaagttctattaatataaattactttggcgggctgcaa
caggctacgaatctgcctaagttgctgaacacgcagcaatacctgaatgtgcttgaaaaa
gcatggaacaattcggggattgcaggcacgaacccctatacagcagataaatcgcgtacc
gatctggccaatacggattggttggacgagctgtttgaaacgggtaagacgaatagtgtc
gagctatcggccagcggcggaacggaaaaaacgcagtacttgatttcgggcggttattat
cggcagaatggtattgtcattttcgataacgataaatacgagcggattaactttagggta
aatgttaacagtgcattgtcagaccgattcaaagttggtacgaacatgcagatgacctat
tcgaagcgggatcagatatcggcaaaaggtgatgcgccgggcattataaggcacgcttta
ttaagacctccgctattgagcgtgtataaagatccatctgatccaacctggtctgccact
gatccctttaccgatttgccgttttacagaaataaccaagtgaatacgggctatgagagc
aataaatatgaatatacccgcaacccggtagcggcagcttattttaccgataatgtattc
tcacggatcaagaccttcggcaacgtgtttggcgagtatgcgctgcttgcggataaatca
ttaaagttccgaacaaatgtggggatcgacctcaatgtaaaccataccaaagcctttttt
gaaaattatggtgacgatgatgggagcgcgggccctaatgaccttggtaagggacggatt
aatcggccagagggtttaaatgaagatcgtggaactgatttcaccttgacctggaataat
gtgctttcttatgataaaacatttggatcgcatcatatcagcgcgctggcgggaacggaa
tatattaagaataatggagcttcaatcaatgggtctcgtcggcgttacgattatacctta
ccaactttccgctacctggattatggtagtaccttgctcgatgtatggaacggcggatcg
ggatcagaatatgcactgttcagtatcttcggatcggcaagttatgagtatgagggtaaa
tatatggtgacagcgaatctacgggcggacgaatcttcgcgtttcggtgaaaaccatcgg
tggggttattttccgtcggtttctgctggatggacggtcagcaaagaacagtttatgcaa
aacgtgaagtggattagcgatcttcgtctgcgcgcgagtaccggtacgctgggaaatcag
gagattgataattatgcgtatctgaccttgatgaaacgggtgggtgagaactacctgatt
gatcgttacggaaatcccgatctgaaatgggaaaccactgtacagcataatatcggttta
gatgcgtcgttctttggagatcatgtttctttctcggccgactattttataaaggataca
cgcgacatcctcttgccaatttcgcttcccagtttggtggggaacgtgcaacctaccatc
gttaatgcagggcaggtaaagaacaaagggtttgagttttcactgggataccggaatagt
acggccggtggtttccgctatggagtgaacgcaaacctcgcaaccctatcgaatgaagtg
gtgaagttacatccgaatgtaccttatatcagtggtacggcaacgcgtacgcaggtaggt
aatcctttgaatgcctatttcggctatgtggtggagggaatttatcaaaaccaggcggaa
gtgaacagtcatttgtccggtgtttcgaatccgacgcaaaaaccgggcgatatccgtttt
aaagatctaaacggtgatggcatgatcaatgatcaggatcgtgattttatgggaaaccct
attcctaaattaacctacggacttaaccttactgctgcatacaagggctttgacctggcc
gtgctgatacaaggtgtgcagggtgttgatcgctataacgacggtagaaagatactggat
tttgatacgcgaccgttcaactacacgacagatgtgcttggcgcctgggatggtgaagga
agtagtaacaccattccgagggtgactttcaatgacaacggcagcagccgggtttcgagc
atcatcctggaggatgcatcgtatgcacgattgaaaaacgtagagcttggttactctttt
ggatcgctgatcaaagatacaaaggtgctgaaaaatatgcgcgtgtatgtttcggggcaa
aacctgttgacctggacagattataaggggctggatccggaatcgaccgatctgatcgat
atgggaacatatccttcgtcgagaacctttttgttcggtatcaatgtaactttttaa
DBGET
integrated database retrieval system
