Sphingobacterium sp. 21: Sph21_4997
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Entry
Sph21_4997 CDS
T01450
Name
(GenBank) Helix-turn-helix, AraC domain
KO
K20968
AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shg03000
]
Sph21_4997
Transcription factors [BR:
shg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sph21_4997
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
CENP-C_C
Cupin_2
AraC_N
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
ADZ81494
UniProt:
F4CAL6
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Position
5918939..5919787
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AA seq
282 aa
AA seq
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MQYEAKYITDDIKLSCYEDKFFKSDILFEHHMLIWFISGETKIVLADATYIFREGDIFLI
PRNQLATIINYPKDGKPHQTVVMHLSTARLRGFYANQNGVAKILEPPKIYHFNNHPLLES
CLSSLVPYFEMNELPEHIASLKITEAISILRAIDKSIDNILTNFEEPGKIDLTDYMEKNF
MFNLPLEKFAYLTGRSLTTFKRDFSKVFHTTPQRWLTQKRLELAHYQFTEKKKRPIDVCY
ETGFENLSHFSYAFKKHFGYAPTELLNQPPEPAANFKSTPEH
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacgaagccaaatacataacggatgatatcaaactttcctgttacgaggataag
tttttcaaatcagacattctgtttgagcaccatatgctaatctggttcatttcgggcgaa
acaaaaattgttctggcagatgcgacttatatttttagagagggtgatattttcctgatt
ccaagaaaccagctcgcaaccatcattaattatcccaaagacggcaaaccgcatcagaca
gtcgtgatgcatctttccacagcgagattaaggggtttttatgccaatcagaatggagtt
gccaaaatcttggaaccgccgaaaatctatcatttcaacaatcatccgctgctggaaagt
tgtttatcttccctggtcccgtattttgaaatgaacgagctgccggagcatatcgcgtca
ttaaaaattacggaggccattagtatcctgagggcgattgacaaaagcatagacaacata
ctgaccaattttgaagaaccgggaaaaattgatctgaccgactatatggaaaagaacttt
atgtttaaccttcccctggaaaaattcgcttacctgactgggagaagcctcactaccttt
aaaagagacttcagcaaagtgtttcatactaccccacaacggtggctcacgcaaaagcgg
ctggaactggcgcattaccagtttacggaaaaaaagaagcgcccgattgacgtctgttac
gaaacaggctttgaaaacctgtcgcacttttcgtacgcatttaagaaacattttggctat
gccccaactgaattgctgaaccaacctcccgagcccgccgcaaactttaaatccacgccc
gaacattga
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