Sphingobacterium sp. 21: Sph21_5107
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Entry
Sph21_5107 CDS
T01450
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shg
Sphingobacterium sp. 21
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shg02000
]
Sph21_5107
Transporters [BR:
shg02000
]
Other transporters
Pores ion channels [TC:
1
]
Sph21_5107
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
HTH_Tnp_Mu_2
TIG
YqzM
CooC_C
Big_1
Motif
Other DBs
NCBI-ProteinID:
ADZ81596
UniProt:
F4CCH7
LinkDB
All DBs
Position
complement(6031070..6033730)
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AA seq
886 aa
AA seq
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MRINKRPHYFYKIYGISKEYLYLSTYSIDFIMFKQKLLFLFLITLISQFVFAQQTVTGIV
KDANDVAILGATVLIKGTNLKAVTDVNGEFTIQGTTTLPFILSVSSVGFRTKEVQVQQAS
GNKFNIVLLADDFQLSEVAVTARRRTERVQNVPIPISVVGGARVENAGAFNVNRLKELVP
AVQLYSSNPRNTTLNIRGLGSTFGLTNDGIDPGVGFYVDGVYFARPAATTLDFIDVERIE
VLRGPQGTLFGKNTTAGAFNITTRKPSFTPEVNFEASYGNFGYVQAKSSVTGPLTKNLAA
RVSFSGTQRDGVLYNVATDQNVNDLNNLGFRGQLLYAPSNNVNILFAGDVSRQRPNGYAQ
VVAGVVPTQRAAYRQFEQIIADLGYNLPSRNPFDRKIDHDTPWRSDNDLGGVSLNADIKI
GSGTLTSTTAWRYWNWNPSNDRDFTGLPVLSLSQAPSKHQQWSQEIRYAGDLSSRLSGVF
GVYAIGQRLKTDPYHTEESGAAQWRFSQNSTSDLWATPGLLDGYGIRTYSKLTSFSGAVF
GQLDWSITDQIHLLPGLRFNYDDKKVDFNRQTYGGLQTDDPALLAIKRAVYTDQVFNANT
DNTNLSGQLTLAYKPNDRINSYATFSTNYKPVGLNLGGLPTNNGEPMLELAEIKPEYVTH
YEIGIKTTPLDNATLNFSVYNTDIKDFQTQVQTAEVGVNRGYLANAEKVRVRGAELDGNV
FIGNVFSLYGALSYTDGKYISFKNAPVPLEETGGESAFKDISGGKLPGISKWAGSLGGQV
DIPGKFLTLGGSYFFAIDSYFRSSFSSSPSPSQYLNVDGYLLLNARLGFQASQSVSFFIW
SRNLLDKDYFEQLLPAAGNAGHYAAVLGDPRTFGATIRYSFGRTVR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattaataagcgtcctcattatttctataaaatctacggaatatcaaaagaatat
ctatatttgtctacttattctatagattttattatgtttaaacaaaagctacttttcctt
tttctaatcacactaatctcgcagtttgtttttgcacagcaaacggtcacgggaattgtt
aaagatgccaatgatgtggctattcttggtgcaacagtattaataaagggtactaattta
aaagctgttactgacgttaatggtgaattcaccattcaagggacaacaactttgccgttt
atactttctgtcagttccgtaggattcagaacaaaagaagtgcaggtccaacaggcgagt
ggaaacaagttcaatattgtattacttgccgatgatttccagctttcagaagttgccgta
acggctaggcgtcgtacagaacgtgtgcaaaatgttcccattcctatttctgttgtcggc
ggagctcgtgttgaaaatgcaggtgcattcaatgttaatcgtctaaaagaattggtgcca
gcggtgcaattatattcatctaatcctagaaatacgactttgaatattagggggttaggt
tcgacgtttggacttacgaatgatggcatagaccccggtgtaggtttttacgtcgatggc
gtctactttgcacgcccagcagcaactacactcgattttattgatgttgagcgaatagag
gtgctgcgaggtccccaaggtacgctatttggaaagaatacgacagcaggagctttcaac
atcactactcgtaaacctagctttacaccggaggttaatttcgaagcgagctatggaaat
tttggttatgtccaggcaaaaagctccgttaccggtcccctgacgaaaaatttggcagcc
cgagtttctttttccggtacgcagcgcgatggtgtattatataacgtcgctaccgatcaa
aacgtaaatgatcttaataatttaggctttcgaggacaattactttatgcaccttccaat
aacgtcaatattctatttgcgggtgatgtgtcaagacagcgtcccaatggttatgcccaa
gttgtcgccggggtagttcctacacaaagagcagcttatcggcaatttgaacaaattatt
gccgatctgggatataatctaccaagccgtaatccttttgatagaaaaatagaccacgac
acaccttggcgatcagataatgacttaggaggtgtttctttgaatgcagatattaaaatc
ggatcaggtacattgacttcaacgaccgcgtggcgatattggaactggaatccctcaaac
gatcgcgattttacagggctcccagttttatcgctctcacaagcgccttccaaacatcaa
caatggtcgcaggaaattcgctatgccggtgatctttcatcccgtctaagtggagtgttt
ggtgtttatgcgatcggacaacgattgaagacagatccataccatacggaggaatcaggt
gcagcgcaatggcggttctcgcaaaattcaacgagtgatttatgggccacaccgggattg
ctcgatggatatggtattcggacatattcaaagcttacgtcttttagtggggcagtattt
ggccagctcgactggtcgatcacagaccaaatacatctattgccaggactgaggtttaat
tacgatgacaaaaaagtagatttcaaccgccaaacttatggagggcttcaaaccgatgac
ccagcccttttggcaattaaaagagcagtttatacggatcaggtatttaacgcaaatacc
gataatacgaatctttccggccaactaaccctagcgtataaacccaatgatcgtatcaat
tcttacgctactttctcaactaactacaaaccggtaggacttaacctcggggggttacct
actaataacggtgagccaatgctggaactggcagaaattaaaccggaatatgttacacat
tacgaaattgggataaaaactactcctttggacaatgctactttaaatttttctgtttat
aatacagatatcaaagattttcaaacgcaagtgcaaaccgcggaagtaggcgtaaatcgt
ggttatttagcaaacgcagaaaaagtgagggtacgcggagcagagcttgatggtaatgtg
tttattggcaacgttttttcattatatggagcgctctcgtataccgacggtaagtacatt
tcctttaaaaatgcacctgttccgttagaagaaacgggcggagagtctgccttcaaggat
atttcaggcggcaagctgcctggaatttcaaaatgggcgggatctttaggtggacaagtt
gacattccgggtaaattccttactttaggcgggagctactttttcgcgattgattcttat
tttcgttcttcattttcatcgagcccgtctccatctcaatatttaaatgtggacggttat
cttttactgaacgcgcgactcgggtttcaagcgagtcaaagtgtatcgttctttatctgg
agtagaaacttgctagataaagattacttcgagcaattgcttcccgctgcaggcaatgct
ggtcactatgctgctgtgctgggtgacccacgtacatttggagcgactattcgttacagt
tttggtagaacggtacgatag
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