KEGG   Staphylococcus haemolyticus Sh29/312/L2: ShL2_00846
Entry
ShL2_00846        CDS       T03837                                 
Name
(GenBank) ATP-dependent RNA helicase DEAD box family protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
shh  Staphylococcus haemolyticus Sh29/312/L2
Pathway
shh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ShL2_00846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shh03019]
    ShL2_00846
   03009 Ribosome biogenesis [BR:shh03009]
    ShL2_00846
Enzymes [BR:shh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ShL2_00846
Messenger RNA biogenesis [BR:shh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ShL2_00846
Ribosome biogenesis [BR:shh03009]
 Prokaryotic type
  rRNA helicases
   ShL2_00846
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_30 Flavi_DEAD Cas3-like_C_2 AAA_19
Other DBs
NCBI-ProteinID: AKC75712
UniProt: A0A7Z1N2K2
LinkDB
Position
879548..881059
AA seq 503 aa
MQNFKELGISDKTVETLEAMGFKEPTPIQKDSIPYTLEGKDILGQAQTGTGKTGAFGIPL
IEKVVGQSGVQALILAPTRELAMQVAEQLREFSRGQNVQVVTVFGGMPIDRQIKALKRGP
QIVVGTPGRVIDHLNRRTLKTNGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTML
FSATMPKAIQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDSNG
RRMNALRPPHRKEVLKAREDDIKDKVKNWMSRESEARLKRISSELLEEYDSTELVASLLQ
ELVEANDEVEVQLTFEKPLARKNRQGKGNGSRRGGKRNNKFDNKNKRSKGNFNKKKGKKP
DRRERQDKGRSTMKGRTFADLQK
NT seq 1512 nt   +upstreamnt  +downstreamnt
ttgcaaaattttaaagaactagggatttcggataaaacagttgagacccttgaagcaatg
ggctttaaggaacccacacctatccaaaaagatagtatcccttatacattagaaggaaaa
gacatccttggacaagctcaaactggtacaggtaaaacgggagcgttcgggattccttta
atagaaaaagttgtgggtcaatcaggtgtacaagcgttaatattagcacctacaagagaa
ttggctatgcaagtagctgaacaattaagagaatttagccgtggtcaaaatgtacaagtt
gtaacggtatttggtggtatgccaatcgatcgacaaattaaagctttaaaaagaggacca
caaatcgttgtaggtacaccaggacgtgtcattgaccacttaaatagacgtacattaaaa
acaaatggtattcatacattgattttggatgaagcggatgaaatgatgaacatgggattc
atcgatgatatgagattcattatggataaaattccagctgaacaaagacaaacaatgtta
ttctcagcaacaatgcctaaagcaatccaaactttagtacaacaattcatgaaatctcct
caaatcgttaagacaatgaacaacgaaatgtcagaccctcaaattgatgaatattataca
atagtgaaagagcttgaaaagttcgatacatttactaatttcttagatgtacaccaacct
gaattagccattgtcttcggtagaacaaaacgtcgtgtggatgaattaacaagtgcttta
ttatctaaaggatacaaagcagaaggcttacatggtgatatcacacaagctaaacgttta
gaagtattgaagaaatttaaaaatgatcaaatcgatatattagttgctacagacgttgcg
gcacgtggtttagatatttcaggtgtaagtcatgtatataactttgacattcctcaagat
actgaaagctatacacatagaatcggacgtacaggaagagctggtaaagaaggcatcgct
gttacatttgtaaatccaattgaaatggattacatccgtcaaattgaagattcaaatgga
agacgcatgaacgctttaagaccacctcaccgaaaagaagtattaaaagcgcgtgaagat
gatattaaagataaagtgaaaaattggatgtcacgagaaagtgaagcacgtttgaaacgt
atctcaagcgagttattagaagaatatgatagtactgaattagttgcatcattactacaa
gaattagtagaagcaaatgatgaagtggaagtacaattaacatttgaaaaaccattagca
cgtaaaaatcgccaaggtaaaggtaatggatcacgtcgtggtggaaaacgtaataacaag
ttcgataataaaaacaaacgttcaaaaggtaactttaataagaaaaaaggtaaaaaacct
gaccgtcgtgaaagacaagacaaaggtagatctacgatgaaaggtcgaacattcgcagat
ttacaaaaataa

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