Staphylococcus haemolyticus Sh29/312/L2: ShL2_00846
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Entry
ShL2_00846 CDS
T03837
Name
(GenBank) ATP-dependent RNA helicase DEAD box family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
shh
Staphylococcus haemolyticus Sh29/312/L2
Pathway
shh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ShL2_00846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shh03019
]
ShL2_00846
03009 Ribosome biogenesis [BR:
shh03009
]
ShL2_00846
Enzymes [BR:
shh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ShL2_00846
Messenger RNA biogenesis [BR:
shh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ShL2_00846
Ribosome biogenesis [BR:
shh03009
]
Prokaryotic type
rRNA helicases
ShL2_00846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Flavi_DEAD
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AKC75712
UniProt:
A0A7Z1N2K2
LinkDB
All DBs
Position
879548..881059
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AA seq
503 aa
AA seq
DB search
MQNFKELGISDKTVETLEAMGFKEPTPIQKDSIPYTLEGKDILGQAQTGTGKTGAFGIPL
IEKVVGQSGVQALILAPTRELAMQVAEQLREFSRGQNVQVVTVFGGMPIDRQIKALKRGP
QIVVGTPGRVIDHLNRRTLKTNGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTML
FSATMPKAIQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDSNG
RRMNALRPPHRKEVLKAREDDIKDKVKNWMSRESEARLKRISSELLEEYDSTELVASLLQ
ELVEANDEVEVQLTFEKPLARKNRQGKGNGSRRGGKRNNKFDNKNKRSKGNFNKKKGKKP
DRRERQDKGRSTMKGRTFADLQK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaactagggatttcggataaaacagttgagacccttgaagcaatg
ggctttaaggaacccacacctatccaaaaagatagtatcccttatacattagaaggaaaa
gacatccttggacaagctcaaactggtacaggtaaaacgggagcgttcgggattccttta
atagaaaaagttgtgggtcaatcaggtgtacaagcgttaatattagcacctacaagagaa
ttggctatgcaagtagctgaacaattaagagaatttagccgtggtcaaaatgtacaagtt
gtaacggtatttggtggtatgccaatcgatcgacaaattaaagctttaaaaagaggacca
caaatcgttgtaggtacaccaggacgtgtcattgaccacttaaatagacgtacattaaaa
acaaatggtattcatacattgattttggatgaagcggatgaaatgatgaacatgggattc
atcgatgatatgagattcattatggataaaattccagctgaacaaagacaaacaatgtta
ttctcagcaacaatgcctaaagcaatccaaactttagtacaacaattcatgaaatctcct
caaatcgttaagacaatgaacaacgaaatgtcagaccctcaaattgatgaatattataca
atagtgaaagagcttgaaaagttcgatacatttactaatttcttagatgtacaccaacct
gaattagccattgtcttcggtagaacaaaacgtcgtgtggatgaattaacaagtgcttta
ttatctaaaggatacaaagcagaaggcttacatggtgatatcacacaagctaaacgttta
gaagtattgaagaaatttaaaaatgatcaaatcgatatattagttgctacagacgttgcg
gcacgtggtttagatatttcaggtgtaagtcatgtatataactttgacattcctcaagat
actgaaagctatacacatagaatcggacgtacaggaagagctggtaaagaaggcatcgct
gttacatttgtaaatccaattgaaatggattacatccgtcaaattgaagattcaaatgga
agacgcatgaacgctttaagaccacctcaccgaaaagaagtattaaaagcgcgtgaagat
gatattaaagataaagtgaaaaattggatgtcacgagaaagtgaagcacgtttgaaacgt
atctcaagcgagttattagaagaatatgatagtactgaattagttgcatcattactacaa
gaattagtagaagcaaatgatgaagtggaagtacaattaacatttgaaaaaccattagca
cgtaaaaatcgccaaggtaaaggtaatggatcacgtcgtggtggaaaacgtaataacaag
ttcgataataaaaacaaacgttcaaaaggtaactttaataagaaaaaaggtaaaaaacct
gaccgtcgtgaaagacaagacaaaggtagatctacgatgaaaggtcgaacattcgcagat
ttacaaaaataa
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