Staphylococcus haemolyticus Sh29/312/L2: ShL2_00945
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Entry
ShL2_00945 CDS
T03837
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shh
Staphylococcus haemolyticus Sh29/312/L2
Pathway
shh03030
DNA replication
shh03430
Mismatch repair
shh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ShL2_00945
03430 Mismatch repair
ShL2_00945
03440 Homologous recombination
ShL2_00945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shh03032
]
ShL2_00945
03400 DNA repair and recombination proteins [BR:
shh03400
]
ShL2_00945
Enzymes [BR:
shh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ShL2_00945
DNA replication proteins [BR:
shh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ShL2_00945
DNA repair and recombination proteins [BR:
shh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ShL2_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKC75811
LinkDB
All DBs
Position
complement(983190..983849)
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AA seq
219 aa
AA seq
DB search
MNSFPLYFILRMQHSGKIFIFLAKIKESILERTVLGMGNAFIALDFETANGKRTSICSVG
MVKVVNNEIVESFYTLVNPFDYFSQTNIEVHGITPEDVIDAPSFEYVFPYMMQFIDKLPV
VAHNAAFDMNVLHQSLKQLNIETPSMIYFCSYQLAKRTIDAYRYGLKHLMKHYKLDFHGH
HDALNDAKACAMITFRLLKHYDNLQSMLQIYGKNLKDKG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatttccactctattttattttaagaatgcaacattctggaaaaatatttata
tttttagctaaaataaaagaatcaatacttgaaaggacagtgttaggaatgggaaatgcc
tttattgcattagacttcgaaactgcaaacggtaaacgtacaagtatttgctctgttggt
atggtcaaagtagttaacaatgagattgtggaatctttttatactttagttaaccctttt
gattatttctctcagacgaatattgaggttcatggtattacacctgaagacgtaatcgat
gctcccagttttgaatatgtatttccctatatgatgcaatttattgataaattacctgtt
gttgctcataatgctgcttttgatatgaatgtacttcatcaaagtttaaaacagttaaat
atagaaacaccctccatgatttatttctgttcatatcaacttgctaaacgtacaattgat
gcatatcgttacggactaaaacatttaatgaaacattataaattagattttcacggtcat
catgatgcactcaacgatgctaaagcatgtgcaatgattacgtttagattattaaaacac
tatgacaatttacaaagtatgctccaaatttatggcaaaaatttaaaagataaaggttaa
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