Staphylococcus haemolyticus Sh29/312/L2: ShL2_01167
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Entry
ShL2_01167 CDS
T03837
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
shh
Staphylococcus haemolyticus Sh29/312/L2
Pathway
shh03410
Base excision repair
shh03430
Mismatch repair
shh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ShL2_01167 (recJ)
03430 Mismatch repair
ShL2_01167 (recJ)
03440 Homologous recombination
ShL2_01167 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shh03400
]
ShL2_01167 (recJ)
DNA repair and recombination proteins [BR:
shh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ShL2_01167 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ShL2_01167 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ShL2_01167 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
AdoHcyase
Motif
Other DBs
NCBI-ProteinID:
AKC76030
LinkDB
All DBs
Position
1236139..1238412
Genome browser
AA seq
757 aa
AA seq
DB search
MIKSKYNWLYEPPTEYINETLIKKYQLTPIIKKLLESKSITDDESIKALLDETIINHDPW
LLSDMEKAVTRINEAIDKNERILVYGDYDADGVTSTTILVKTLQTLGAEVGWYIPNRFSE
GYGPNELAFRNAYDEGVSLIITVDNGIQGHKEIEMVQKLGVDVIVTDHHEIGHTLPEAYA
IVHPMHPEYEYPFHFLCGAGVAYKLSQVLLDNPPNYFVSLAAIGTIADLVSMTDENRSIV
KQGLSFLNQSCPIQIKALLNQAGYNDTINEETVGFIIGPRLNAVGRLEDASLAAELLMTE
DEEEAEFLAEQVEHFNVERKEIVAQITDEALAIAEEKVNNGNQFLLLAKENWHEGVLGIV
ASKIVETYALPTLILNIDLEQNHAKGSARSIEQVSMFEILSAHQDLISKFGGHHMAAGMT
MEIDYIEALEQGLNDWMFKLSEHTSLEPTKHVSVKLEENDISINNIRDIQRLSPFGTDFE
KPLLEIDDNEVVDVRAIGKDKNHLKLVTGQLQLQSIFWKNGQLATQIEPGQPINLLGNLQ
INEWNGNQSPQFIIQDIATNNEQILDYRSKRKQLNIDPNDTKVAFLIHPKKEKLNHNYYY
YGDKIDQEHEVVILRDLPNDLDSLKDSLKNLNYSQLYLVLQHQQSIYFDGMPTSNQFKSC
FKALMTKKETNLEQEGMLLCQHLNVKPNILKFMLKVFYELGFVTEENGIIKIVDNANKQN
IETSRVYQLRQSRMEVEKLLLYDDFTQLKTWIKSQKG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatctaaatataactggctctatgaacctccaacagaatacataaatgaaact
ttaataaaaaaatatcaattaacaccgattataaaaaaactgcttgaaagtaaatcgata
actgatgatgagtcaattaaagccttattagatgaaactatcattaaccacgatccatgg
ctattaagtgatatggaaaaagcggtgactcgaatcaatgaagcaattgataaaaatgag
cgtatattggtatatggtgattatgatgccgatggtgtcacttctacaactatattagtt
aaaacattgcagacattaggggctgaagtgggttggtatattcctaatcgattttcagaa
ggttatggtcctaatgaacttgcatttagaaatgcatatgatgaaggcgtgtctctcatc
ataactgtcgataatggcatacaaggtcataaagagattgaaatggtacaaaagctagga
gttgatgtcatagtaactgatcatcatgaaattggacatactttgcctgaagcgtatgcc
atcgtacatccaatgcatccagagtatgaatacccatttcactttttatgtggtgctggt
gtagcttacaaactgtctcaagttttattagacaatcctcctaattattttgtaagttta
gctgcgattggtactatagcagatttagtgtcaatgacagatgaaaaccgctctatagta
aaacaaggtttatcatttttaaatcaaagctgcccgattcaaattaaagcattacttaac
caagctggttataatgacacgattaacgaagaaactgtaggttttattatagggccgcga
cttaatgccgttggtagattagaggatgcatcattagctgctgagttattaatgaccgaa
gatgaagaagaagctgaatttcttgctgaacaagtagaacattttaatgttgaacgtaaa
gaaatagtagctcagataactgatgaggcactagccattgctgaagaaaaagtaaataat
ggcaatcaatttttactattagctaaagaaaattggcatgaaggtgtcttaggtatagta
gcatctaaaattgttgagacatatgcattacctaccttaattttgaatattgatttagaa
caaaatcatgctaaaggatcagctcgtagtatagaacaagtttcaatgtttgaaattttg
agtgcacatcaagatttaatttctaagtttggtggtcatcatatggctgcgggtatgact
atggagatagattatattgaagcattagagcaaggattaaatgactggatgtttaaatta
tcagaacatacgtcactagagccgacaaaacatgtatcagttaaattagaagagaatgat
atttctataaataacattcgtgatattcaaagactaagtccatttggcacagactttgaa
aaaccattattggaaattgatgataatgaagtcgttgatgttagagcaattggaaaagat
aaaaaccatttaaaattagtaaccggtcagttacaattacaaagcatattttggaaaaat
ggtcagttagcaactcaaattgaacctggtcaaccaatcaatctactaggaaatttacaa
atcaatgaatggaacggaaatcaatcaccacagtttattattcaagatatagcaacgaat
aatgaacaaatattagattaccgaagtaaacgtaaacaattaaatatagacccaaacgat
actaaagttgcttttttaatacaccctaaaaaagaaaaattgaatcataattactattat
tatggtgataaaatcgatcaagaacatgaagtagtaattttaagagacttgcccaatgat
ttagacagtcttaaagatagtctcaaaaacttaaattattcacaactctatttagtactg
caacatcagcagagtatatattttgatggtatgcccacgtcaaatcaatttaaaagctgt
ttcaaagcgctaatgaccaaaaaagaaaccaatcttgaacaagagggtatgttactgtgt
caacatttgaatgttaaacctaatattttaaaatttatgcttaaagtattttatgagtta
ggttttgttacagaagaaaatggtataattaaaattgtagataatgctaacaaacaaaat
attgaaacaagtcgcgtttatcaattaagacaatcaagaatggaagttgagaaactttta
ctatatgatgatttcacgcaactaaaaacttggatcaaatcacagaagggttag
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