Staphylococcus haemolyticus Sh29/312/L2: ShL2_01240
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Entry
ShL2_01240 CDS
T03837
Name
(GenBank) ATP-dependent RNA helicase DEAD/DEAH box family protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
shh
Staphylococcus haemolyticus Sh29/312/L2
Brite
KEGG Orthology (KO) [BR:
shh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shh03019
]
ShL2_01240
03009 Ribosome biogenesis [BR:
shh03009
]
ShL2_01240
Enzymes [BR:
shh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ShL2_01240
Messenger RNA biogenesis [BR:
shh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ShL2_01240
Ribosome biogenesis [BR:
shh03009
]
Prokaryotic type
rRNA helicases
ShL2_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKC76103
UniProt:
A0A7Z1N5U6
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All DBs
Position
1310986..1312332
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AA seq
448 aa
AA seq
DB search
MATHPFELFNLDSKLIEAIKDLKFDKPTEIQNRIIPRIKKGVNLIGQSQTGTGKSHAFLL
PLIDKIDVENKEPQSIVVAPTRELAQQLYQAANHLATFKQGIKVSLFIGGTDIEKDRQRT
SNQPQLVIGTPTRINDLAQSGHLHAHLASYLIVDEADLMIDLGLIEDVDLIASRLDENSH
IAVFSATIPKSLQPFLNKYLSNPEYVEVDSKSQNKKNIEFYLIPTKGTEKVDKTLQLIDI
LNPYLCIVFCNSRDNADELANSLNAAGIKVGMIHGGLTPRERKQQMKRIRNLEFQFVIAS
DLASRGIDIEGVSHVINFDVPKDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHLITLIED
KGYHFENVDVKNNELTPIKAHNTRRKRVRKDDHLTNEVKHKVRSKTKNKVKPGYKKKFKQ
EVERMKRQERKQFSKRQNRQQRKNNKKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcacccatttgaattatttaatttagactcaaaacttatagaagcaattaaa
gacttaaaatttgataaaccaactgaaatacaaaatagaataattccaagaattaaaaaa
ggcgtaaatttaataggtcaatctcaaacaggtacagggaaatcgcatgcatttttatta
ccgttaatagataaaatagatgttgaaaataaagaacctcaatctatcgtggtggcacct
acaagagaattagcacaacagttatatcaggcagcaaatcatctagctacttttaaacag
ggcattaaagttagtttgtttattggtggtacagatattgagaaagatagacagcgtaca
agtaatcaaccgcaattagtaataggaacaccgactagaattaatgatctagctcaaagt
gggcatctacatgcgcatttggcatcttatcttatagtggatgaagctgatttaatgatt
gatttaggattaattgaagatgtagatttaattgcttcacgcttagatgaaaattcacat
atagctgtcttcagtgctacaattcctaaatcattacaaccatttttaaataaatatcta
agcaatccggaatatgtagaagtggattccaagtctcaaaataaaaaaaatattgaattc
tatttaattccaactaaaggaactgaaaaagtagataaaacacttcaattaatcgatatt
ttaaatccatacctatgtatcgttttctgtaatagtagagataatgcggatgagctggca
aattcactcaatgctgctggaattaaagttggcatgatacacggaggtttaacaccaaga
gagcgtaagcaacaaatgaaacgtatacgcaatttagagtttcaatttgtaatcgcaagt
gatctagcttctcgaggtatagacattgaaggcgttagtcatgttattaattttgacgta
cctaaagatattgacttctttacacaccgtgtgggcagaacaggtagaggtaattataaa
ggtgtggcaataacactctatagtccggatgaagaacatttaatcacactaattgaagat
aaaggctaccattttgaaaatgttgatgttaaaaataatgaattaacaccaattaaagca
cataatactcgacgtaagcgtgtaagaaaagacgatcacttaacgaacgaagtgaagcat
aaagtgcgaagtaagactaaaaataaagtcaaaccaggttataaaaagaaattcaaacaa
gaagtcgaaagaatgaagagacaagaaagaaaacaatttagtaaaagacaaaatagacaa
caacgaaaaaataataaaaagggttag
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