Slackia heliotrinireducens: Shel_10450
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Entry
Shel_10450 CDS
T00981
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
shi
Slackia heliotrinireducens
Pathway
shi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Shel_10450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_10450
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Shel_10450
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Shel_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
AAA_21
RsgA_GTPase
AAA_23
AAA_15
AAA_25
nSTAND3
Viral_helicase1
Ogr_Delta
RNA12
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ACV22080
UniProt:
C7N595
LinkDB
All DBs
Position
1189169..1192051
Genome browser
AA seq
960 aa
AA seq
DB search
MVLASENIVIRGAREHNLKNVDVDIPRDKLVVITGLSGSGKSSLAFDTIFAEGQRRYVES
LSSYARQFLGQMDKPDLDRIDGLSPAVAIDQKTTSRNPRSTVGTTTEIYDYLRLLYARIG
IPHCPECGREIRKRTTDQVADEVLELGEGKRVLILAPVVVGRKGEHTKVFEDLQKEGFSR
VRIDGEVQRLDGTPIKLDKKFKHTIDVVVDRIVLKDSAIGRIAESIETATKLADGRVVVH
VIDEEDAAADAQKSTPGFSTMSAADHFYSLALACPEHGHSMDELQPRDFSFNAPYGACPD
CSGLGSREEVDPSLMIPDPSLSLSQGAIAPFVSGNYYPQVLAAVCKHMGQDVDTPWEDLP
KKTQNALLFGLKGEKVRVDYRTVDGRETYWFIDWTGAIDAVMQRYRDAQSDAQREKYGKY
FATIPCATCGGKRLKPEILAVTVGGKSIDQVCEMSAVECLDFFNGIALSEREAVIATAIV
KEIRARLRFLVDVGLDYLTLERATASLSGGEAQRIRLATQIGAGLMGVLYILDEPSIGLH
QRDNERLIATLERLRDLGNTVIVVEHDEDTIRSADYVIDMGPGAGEKGGYLVSAGTPEEV
AACEKSITGAYLRRDSVIEVPKKRRNPKRGSIKLAGAKENNLKNVTIDIEIGTFTVVTGV
SGSGKSSLITDTLAPALANRLNHAHKRTGAYRKLSGYEELDKIIDIDQSPIGRTPRSNPA
TYIGLWDDIRALFASTPEAKARGYAPGRFSFNVSGGRCEACKGDGQLKIEMHFLPDVYVP
CEVCGGKRYNRETLQVTYRGKNVYDVLDMTVDEALEFFKNIPGLSRKLQTLHDVGLGYIR
LGQPATTLSGGEAQRVKLASELQRRQSGKTIYVLDEPTTGLHMEDVKQLLEVLQRLVDCG
NTMLVIEHNLDVIKSADRVIDLGPEGGDRGGTVVAKGTPEKVANNENSHTGRFLRSVLGM
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggttttggcaagcgagaacatcgttattcgcggagcccgtgaacataatctaaaaaac
gtcgatgtggacattcctcgtgacaagcttgtggtcatcactggcttgtccggaagcgga
aagtccagccttgcgttcgataccatctttgctgagggacaacgccgatacgtggaaagc
ctttcttcgtatgcacgccaattcttgggccagatggacaagcccgatttggatcgtatt
gacgggctgtcgcccgctgtcgccatcgaccagaaaaccacttctcgaaatcccaggtcg
acggtgggcacgacgacggagatctacgactacctgcgtcttctgtacgcccgcatcggc
attccgcattgtcctgagtgcggtcgagagattcgtaagcgcaccactgatcaggttgcc
gacgaggttttggagctgggtgagggcaagcgcgtcctcatccttgctcctgttgtcgtg
ggtcgtaagggcgagcacacgaaagttttcgaggaccttcagaaagagggattctcgcgt
gtacgcatcgacggagaggtccagcgacttgacggcacgcctataaagctcgacaaaaag
ttcaagcacaccatcgatgtcgtcgtcgaccgcatcgtgctgaaggattctgccatcgga
cgtatcgccgagtcgattgaaacagcaaccaagcttgcggatggccgagtcgtcgtgcat
gtcatcgacgaagaggatgctgctgccgatgcacagaagagcacccctggtttttcgacc
atgtctgccgccgatcatttctactctctggcgttggcgtgccctgagcacggtcactcc
atggatgagcttcaacctcgtgatttcagcttcaatgctccttacggtgcttgtccggac
tgctctggcctcggcagcagggaagaggtcgaccccagcctgatgattcccgacccctcg
ctgtctttgagccagggcgccatcgcgcctttcgtgtcgggcaactactacccccaggtc
ttggcggcggtgtgcaaacatatgggacaagacgtggacactccttgggaggatctgccc
aaaaagacgcagaacgctctgctgttcggtctcaaaggcgaaaaggtccgcgtcgattac
cgtaccgtggatggcagggagacatattggttcatcgattggacgggcgccatcgatgcg
gtcatgcaaaggtaccgcgatgcccagtccgacgcccagcgcgagaaatacggaaagtac
tttgccaccattccttgtgcgacctgcggtggaaagcgcctgaaacccgagattctcgcg
gttaccgtcggcggcaagagcatcgaccaggtttgtgagatgagcgccgtcgaatgcctt
gacttcttcaacggaatcgcgctttccgagcgagaggccgtcatcgccacggccatcgtc
aaagagattcgagctcgtctgcggttcttggtggatgtggggttggactacctcaccctt
gagcgcgcaacggccagcctatcgggtggcgaggcccaacgcatccgtcttgctacgcag
atcggggcaggcctcatgggggttctctacatcctggacgaaccctccatcggactgcat
caacgtgacaacgagcggcttatcgccacgttggagcgcctacgtgatttgggcaacacg
gttatcgtcgtcgagcatgacgaggacaccatccgttctgcggattacgtcatcgacatg
ggccctggcgcaggcgagaaaggcggttatctggtttcggcgggaacgcccgaggaggtt
gccgcatgtgagaagagcattacaggtgcatatttgcgtcgtgacagcgttattgaagtg
ccgaaaaagcgccgcaatccgaaacgcggctccatcaaactggcgggcgccaaggagaac
aacctcaagaatgtgacgatcgatatcgaaatcggaacgttcaccgtggtcacgggcgtg
tctggaagcggcaagagctcgcttatcaccgatacgctggcccctgccttggcaaaccgt
cttaatcatgcccataagcgcacgggcgcgtaccgcaagctcagcggctatgaggagctg
gacaagattatcgatatcgaccagagtcccatcgggcgtacgcccaggtcgaatccggcg
acgtacatcggtctttgggatgacatccgcgcgttgttcgcctcgacgcccgaggcgaag
gcccgcggctatgcccctggccggttcagcttcaacgtgagcggcggccggtgcgaggca
tgcaagggtgatggccagcttaagatagaaatgcatttcctgcctgatgtatacgtgcca
tgcgaagtatgcggtggtaaacgctacaaccgcgaaacgcttcaggtgacgtatcgcggc
aagaacgtttacgacgtgctcgatatgacggtggatgaggccttggaattcttcaagaac
attcccggcctgtcccgtaagctgcagacgctgcatgatgtgggtctcggctacattcgc
ctcggacagcctgccaccacgctttcgggcggcgaggcgcaacgcgtgaagctcgcaagc
gaacttcagcgccgtcagtcgggcaagactatctacgtgctggacgagcccacgaccggt
ttgcacatggaagatgttaaacagttgctcgaggtgcttcaacgcctggtcgactgcggc
aacaccatgctggtaatcgagcacaacctcgatgtgatcaagtctgccgaccgagttatc
gacttgggtcccgaaggcggcgaccgcggcggtactgtggtggccaagggcacgcctgaa
aaggtcgccaacaacgaaaacagtcatacaggcaggttcttgaggtctgtgcttggaatg
taa
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