Slackia heliotrinireducens: Shel_10590
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Entry
Shel_10590 CDS
T00981
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
shi
Slackia heliotrinireducens
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_10590
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shel_10590
Archaeal homologous recombinant proteins
Shel_10590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ACV22094
UniProt:
C7N5A9
LinkDB
All DBs
Position
complement(1205801..1209046)
Genome browser
AA seq
1081 aa
AA seq
DB search
MKPLHLTMSAFGPYADEVSIDFTTFGDSGLYLICGDTGAGKTIIFDAIAFALYGTPSGEN
RTSSMLRSDFADPDTPTFVELDFSYRGSTYRIRRNPVYQRPKKRGEGFTTENERAEITLP
DGSTIAGKQHVDETVVGILGIERLQFMQIVMIAQGDFRKLLSADTQTRAPIFRRIFATEP
LLGFQKRMAERKNALEADHDRVMASVQNYADMIAVDETDEHARSLKEELSGGVQPETALR
EAERLVEADTSAADAAKQRAAKLQAIRDEAKAALESAQTNNGLIDRRDAALQVSEQALGA
KTQAKAALDADAHLDDEIAALRARERDLRSNLPSYDEYGRLQSAFDEAARVLESARQAKT
QVETELTQARKRRDEAEQAADEQAKAQHNRDMLAERLKIDRANDERCAAQAKTYDNILDA
DKLIGKLKQQVEEAKSAQAAINAAIEQGVSDIEQAAAEASGLGAATEDLFDAENDKRAAQ
ADIARLDACSAERTELADASAAAAKDAAAAQEAYLQAQSTFLECQTKLAEARKAYLDEQA
GIIAAGLEPGSPCPVCGSTDHPAPAQARTDIPSSADLDELQEHYNETLAVANEASQNSGA
LKSDADGKRARLDAHIQEHGRAEELAALRAAAEKALAEAEARIDRSEQAKARCEQQAKTA
QEKRAVVEAKRADLQNALDDLAALKSQLSAAEATRATLQDGLETTDEKTIRSQAQQAHEQ
FLLTQGAFDEAVDLLDRLSELVKQAGSAAQALDDLEAELEQATAAQQEATTASITAKAAA
QAAAAKLPFPTKQELEAAIDEAAAQADASFETRQKQKDAFDQASIAAAEAAARAEELVRQ
AGDDARRQDVSQLEQDLAEAEQQLQEAQDAANAIERRIHTNTSLLKRIEHELKRSADIEA
QYKEVAIVSDVANGRMVKASHYAFETYVQSRYFEQMISAANRRLDTLSDGRYELVRREKG
FSNRQVGLDLDVKDHYTGKTRDASSLSGGEAFKASLALALGLSDTVQAHAGGIQLDTMFI
DEGFGSLDDESLRLALKVLTELSGSDKHIGIISHISELKDNIDRKIVVERGRDGSSIHVE
T
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttgcatctcaccatgtcggccttcggcccctacgccgacgaagtctccatc
gacttcacgaccttcggcgacagcggactgtacctgatctgcggcgacaccggtgcaggc
aaaaccatcatcttcgacgccatcgccttcgctctgtacggcacaccgtcgggcgagaac
cgcacgtcaagcatgctgcgaagcgacttcgccgacccggacacgcccaccttcgtggag
ctggatttcagctaccgcggcagcacctaccgcatcaggcgaaaccccgtctaccagcgc
ccgaagaaacggggcgaggggttcactaccgaaaacgaacgggccgagataaccctgccc
gacggctcgacgatcgccggcaagcagcacgtggacgaaaccgtggtcggcatcctgggc
atcgagaggctccagttcatgcagatcgtgatgatcgcccagggcgacttccgcaagctg
ctgtccgccgacacccagacacgtgcgcccatcttccgccggatcttcgccaccgagcct
ttgctgggcttccagaaacgcatggccgagcgcaagaacgccttggaggcggaccacgac
cgggtcatggcaagcgtgcagaactacgcggacatgatcgccgtggacgaaacggacgag
cacgcccgcagcctgaaagaggaactgtcaggcggcgtgcagccggaaaccgccctgcgt
gaggccgagcggctcgtcgaggccgacacgtcggccgcggatgccgccaaacagagagcg
gccaagcttcaggccattcgcgacgaggcgaaggcggctttggagtcggcccaaaccaac
aacgggctcatcgaccggagggatgcggccctgcaagtctccgaacaggcgctgggtgcc
aaaacccaggcgaaggcggccctggatgcggatgcacatctggatgatgagatagctgcg
cttcgggcccgcgaacgcgacctgcgttcgaaccttccttcctacgacgagtatgggcgg
ctgcaatccgccttcgacgaggccgctcgcgtactggagtcggcacgtcaggcgaaaacg
caggtggaaaccgagctgacacaggccagaaagcgtcgcgacgaagccgagcaggccgcc
gacgagcaggcgaaagcccagcacaatcgtgacatgctggccgaaaggctcaaaatcgac
cgggccaacgacgagcgttgcgctgcccaggccaagacctacgacaacatattggatgcc
gacaaactcataggcaagctcaagcagcaggtcgaagaggcgaagtccgcccaggccgct
atcaacgcagccatcgagcaaggcgtttcggacatcgaacaggccgcagccgaggcaagc
ggtctgggcgcggcgaccgaggacctgttcgacgccgaaaacgacaaacgggcagcccaa
gccgacatcgcgcgtctggacgcatgctccgccgaacgcacggagctcgccgatgcctcc
gcggcggccgcgaaagacgccgccgccgcacaggaggcctaccttcaggcacagagcacg
ttcttagagtgccagacgaagcttgccgaggcacgcaaggcttatctagacgaacaggcc
gggatcatcgctgccgggcttgagccgggcagcccctgcccggtctgcggatcgacggac
caccccgccccggcgcaggcccgtaccgacattccgagcagcgccgacctggatgagctg
caagagcattacaacgagactctggccgtagctaacgaagcgtcccagaactcaggtgcg
ctcaagtccgacgccgacgggaagcgcgcgcggctcgacgcccacatccaggagcacggc
cgcgccgaagaactcgcagcgctgcgtgctgctgccgaaaaagccctggccgaagccgaa
gcgcgcatcgatcggtccgagcaggccaaagcccgctgcgagcagcaggcgaaaaccgca
caggaaaagcgcgcagtcgtcgaggccaaacgtgccgacctgcagaacgcgcttgacgac
ctggcagccctcaaatcccaactgtctgcggccgaggccacccgggcgaccctgcaagat
ggcctggagacgacagatgaaaagaccatccgcagccaggctcagcaggcccacgagcag
ttccttctgacccaaggcgccttcgacgaggccgtcgatctccttgaccgactatccgag
ctggtcaagcaggctggttccgctgcgcaggcccttgacgacctcgaggctgagctggaa
caggcgactgccgcccagcaagaggccaccaccgcgtcgatcacggcgaaagccgcagca
caggccgcagcagccaagctccccttccccacgaagcaggagctcgaagcggccatcgac
gaagcagccgcacaggccgacgcctccttcgaaacccgtcagaagcagaaagacgctttc
gaccaggcttccatcgccgcagccgaagccgccgcacgggccgaggagctggtccgccag
gcgggagacgacgcccgtcgtcaggacgtttcccaactcgaacaggacctggccgaagcc
gagcagcagctgcaggaggcgcaggacgccgcgaacgccatcgagcggcgcatccacacg
aacacctcgctgctcaaacgcatcgaacacgagctgaaacgctcggccgacatcgaggcg
cagtacaaagaggtcgccatcgtgtccgacgtggcgaacgggcggatggtcaaggcaagc
cactacgctttcgaaacctacgtgcagagccggtacttcgagcagatgatctccgccgcc
aaccgacggctcgacaccctgtccgacggccgctacgaactggtgagacgcgagaaggga
ttcagcaaccgccaggtgggactggatcttgacgtgaaggaccactacaccggcaagacc
cgcgacgcctcgtcgctgtcgggcggcgaggccttcaaggcgtcgttggccttggcactt
ggcctgtccgacaccgtgcaggcccacgccggcggcatccagctcgataccatgttcata
gacgagggcttcggatcgttggacgacgagtcgctgcggctggcgctcaaggtgctgacg
gagctttctggaagcgacaagcacatcggcatcatcagccacatcagcgagctcaaggac
aacatcgaccggaagatcgtcgtggagcgcggccgagacgggtcatccatccacgtcgaa
acctaa
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