Slackia heliotrinireducens: Shel_10600
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Entry
Shel_10600 CDS
T00981
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
shi
Slackia heliotrinireducens
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_10600
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shel_10600
Archaeal homologous recombinant proteins
Shel_10600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
FBPase_2
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ACV22095
UniProt:
C7N5B0
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All DBs
Position
complement(1209048..1210193)
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AA seq
381 aa
AA seq
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MKLLHVSDLHIGKRVHEFPMIEDQRHILAQIVDTIRERDVDALLIAGDIYDKSSPSAEAV
ALFDDFLCAVADLNVPCLAVAGNHDSQERIAYASRLLASRNVYLSPVFDGAIDHVTLHDE
HGPVTFWLIPYLRFSEIKSCFDEFDGDYTDAMAKLIGQSGVNPEERNVALAHQFVTWQSV
QPERSDSEIGNIGGVDNIDARAFDVFDYVALGHIHRPQRIGRDTVRYSGSPLKYSISEAP
WPKSMPLVTLGKKGSVDFELVPFKPLHDLREIRGPLADLTSPDVVGAADAEDYLHVTLTD
EEPWIDAMSRLREHYPNVMRLDYDNAATRSASQAAVSAPGELESMSSEDLFAEFFEMRTG
IPLTQAQTDLVHAVLTECGAK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgcatgtatccgacctgcacataggcaaacgcgtccacgagttcccgatg
atcgaggatcagcgccacatcctggcccagatcgtcgacacgattcgggaacgggacgtg
gacgcgctgctcatcgcgggcgacatctacgacaagtcctcccccagcgccgaggccgtg
gcactattcgacgatttcctgtgcgccgtggccgacctgaacgtgccgtgcctggccgtc
gccggcaaccacgactcgcaggagcgcatcgcctacgcctcccgtcttctggcgagccgc
aacgtgtacctgtcccccgtgttcgacggcgccatcgaccatgtcacgctgcatgacgag
cacggccccgtgacgttctggctcatcccgtacctgcggttctcggaaatcaaatcctgt
tttgacgagttcgacggcgactacaccgacgccatggcgaagctgatcgggcaaagcggc
gtgaaccccgaagaacgcaacgtcgcgctggcccaccagttcgtcacctggcagtcggtg
cagcccgaacgctcggattcggaaatcggcaacatcggcggcgtggacaacatcgacgcc
cgcgccttcgacgtgttcgactatgtggcgctgggccacatccaccggccgcagcgtatc
ggccgcgacaccgtccgatacagcggctcgcccctcaaatactcgatttcggaggccccg
tggcccaagagcatgccgctggtcacccttgggaagaaaggctcggttgacttcgagctc
gtcccctttaagcctttgcacgacctgcgcgagattcgcgggccgcttgcagacctcacg
tccccggacgtggtgggcgccgccgacgccgaagactacctgcatgtgacgctgaccgac
gaggagccttggatcgacgccatgagcaggctccgcgagcactaccccaacgtcatgcgg
ctggactacgacaacgccgccacccgctccgcgtcgcaggcggccgttagcgctcccggc
gaactggaatcgatgtcgtccgaggacctgttcgccgagttcttcgagatgcggacgggc
atccctttgacgcaagcccagacagacctggtgcatgccgtcttgaccgaatgcggggcg
aagtag
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