Slackia heliotrinireducens: Shel_12990
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Entry
Shel_12990 CDS
T00981
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shi
Slackia heliotrinireducens
Pathway
shi03030
DNA replication
shi03410
Base excision repair
shi03420
Nucleotide excision repair
shi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shel_12990
03410 Base excision repair
Shel_12990
03420 Nucleotide excision repair
Shel_12990
03440 Homologous recombination
Shel_12990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shi03032
]
Shel_12990
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_12990
Enzymes [BR:
shi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shel_12990
DNA replication proteins [BR:
shi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Shel_12990
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Shel_12990
NER (nucleotide excision repair)
GGR (global genome repair) factors
Shel_12990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACV22326
UniProt:
C7N5Z1
LinkDB
All DBs
Position
1489642..1492278
Genome browser
AA seq
878 aa
AA seq
DB search
MPKKIAVIDGNSLMYRAYHAVPPTMNAPDGTPTNAVFGFIAMFLKLYEMAKPDAVICAFD
AGKPEFRMKALETYKAQRPPMDDELRVQFPVIESLLEAMSVPVVRLKGWEGDDILGTIAA
RDEELGYETLLITGDKDAYQLVTDLTRVVTTKKGITDVAIYGPAEVEERYGVTPEQFPDF
LGLKGDSADNIPGVPGIGDKTAAKLLQNYGTMDGIYENLDKLKGKQLENLTNNRDVAFIS
REVATIVRDVDLEVDLEAAAFPAFDAQAVTDAFHAVRFNSHLQKMLGLAGQEAPVTAAAA
IELPKADVLTGAEAAEGLAAAIDAGQMIALEFVVPDQASLFDDFKTMFAGTAEAVFKFTD
EEVAPAFGRVVREARFCALDVKKTLQEGYPADTAKDAELTADDVRHADYFDIGLAAYLLN
SNTDVFAYDALADTYLASSLPETKDDDAAAAVHVLVAPRLVNALREALDKDGSADVYYKI
DLPLVSTLTLMERVGAQLDVDALAAMGSATRGEIDSLRAHIHELAGEEFNVDSPKQLGVI
LFDKLGLPHGKKTRTGYSTNAATLKKLQSIHPIADEVLRYRELAKMSSTYIDALPRMRAD
DGRVHTHFNQTVTTTGRLSSSDPNLQNIPVRTDFGRRIRECFVPLHEGDVFVSADYSQIE
LRLLAHLSGDEHLVDAFCSGADFHAATAARVFDVPVDEVTPQLRSRAKAVNFGIVYGQQA
FGLAQSLDIGFKEAQDMIDRYFEAYPGVRSYLDKTVEDAKQTGYAVTMFGRKRHIPELKM
RNAVQRGFGERTAMNHPMQGSAADIIKLAMNEVQRRLIEDGFESQLMLQVHDELDLSVPA
DELERLSDMVREVMSTIVELKVPLLVDVSSGPNWAAAH
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaaatagccgtcatcgacggaaactcgctcatgtaccgcgcctaccacgcg
gttccgccgaccatgaacgcgcctgacggcacgcctaccaacgcggtgttcggattcatc
gccatgttcctgaagctctacgagatggccaagcccgacgcggtcatctgcgcgttcgac
gccggcaagcccgagttccgcatgaaggcccttgaaacatacaaggcgcagcgtccgccg
atggatgacgagctgcgcgtgcagttcccggtcatcgaaagcctgcttgaggccatgagc
gtgccggtggtccgcctgaagggttgggaaggcgacgacatccttggcaccatcgccgcc
cgcgacgaggagctggggtatgaaacgctgttgatcaccggcgacaaagacgcgtatcag
ctggtgaccgacctgacgcgcgtcgtcaccaccaagaagggcattaccgacgtggccatc
tacggccccgccgaggtggaggagcgctacggcgtgactcccgagcagttccccgatttt
ctggggctgaagggcgactccgccgacaacatccccggcgtgccgggcatcggcgacaag
accgcggccaagctgctgcagaactacggcaccatggacggcatctacgagaatctggac
aagctcaagggcaagcagctcgagaacctgaccaacaaccgcgacgtggcgttcatcagc
cgcgaggtggctaccatcgtgcgtgacgtggacctggaggtcgacctggaagcggcggcg
tttccggcattcgacgcgcaggccgtaaccgatgcgttccacgcggtgcggttcaattcc
cacctgcagaagatgctggggctggcggggcaggaggcgccggtaaccgctgccgccgca
atcgagttgccgaaagcggacgtgcttacgggagccgaagccgccgaagggctggctgcg
gccatcgacgccggccagatgatcgcgctcgaattcgtcgtgcccgaccaggccagcctg
ttcgacgacttcaaaacgatgttcgccggcacggccgaagccgtgttcaagtttaccgac
gaggaagtggcgcctgccttcggcagggtggtccgcgaagcgcggttctgcgcgttggac
gtgaagaagaccctgcaggaaggctatccggccgacaccgcgaaggatgccgaactgacc
gcggacgacgttcgccatgcggactacttcgacatcggccttgccgcctaccttctgaat
tccaacaccgacgtctttgcctacgatgcgctggctgacacataccttgcatcgtccttg
cccgagaccaaggacgacgacgcggcggcggccgtccacgttctggttgcgccccgcttg
gtgaatgcgctgcgcgaagctctcgacaaagacggctctgcggacgtgtattacaagatc
gacctgccgttggtttccacgttgacgcttatggaacgtgtgggcgcgcagcttgacgtg
gacgccctggccgctatggggtctgccacccgcggtgagatagactcgctgcgcgcgcat
atccacgagctggcaggggaggaattcaacgtggattcccccaagcagctgggcgtcatc
ctgttcgacaagctgggactcccccacggcaagaagacgcgcacggggtattccaccaat
gccgccacgctcaagaagctgcagtccatccaccccatagccgacgaggtgctgcgctac
cgcgagctggccaagatgtcttctacctatattgatgcgttgccgcgcatgcgcgccgac
gacgggcgcgtgcacacgcatttcaaccagacggtgaccaccaccggccggttgagctcc
agcgacccgaacctgcagaacattcccgtccgcaccgatttcgggcgccgcatccgcgag
tgcttcgtgccgctgcacgaaggagacgtgttcgtgtcggcggactattcccaaatcgag
ctcaggctgctggcgcacctgtccggcgacgagcatctggtggacgcgttctgctccggc
gccgatttccatgctgccacggcggctcgcgtgttcgacgttccggtggacgaggtcacg
ccgcagctgcgcagccgcgcaaaggccgttaacttcggcatcgtctacggacagcaggcg
tttggtctggcccagagcctggacatcgggttcaaagaggcccaggacatgatcgaccgc
tacttcgaggcgtatcccggcgtccgctcctatctggacaagaccgtggaagacgccaag
cagacggggtacgccgtcaccatgttcggacgaaagcgccacatccccgagctgaagatg
cgcaacgccgtgcagcgagggttcggtgaacgcacggccatgaaccaccccatgcaaggc
tcggcggccgacatcatcaagctggccatgaacgaggtccaacgccgcctgatcgaggac
ggcttcgaatcgcagctcatgctgcaggtgcacgacgaactggacctgagcgtgcctgcc
gatgagctggaacgcctgagcgacatggtgcgagaggtcatgtcgaccatcgtcgagctc
aaagtgccgctgctggtggatgtgtcgtccggtcccaactgggcagccgcgcactag
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