Slackia heliotrinireducens: Shel_13970
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Entry
Shel_13970 CDS
T00981
Name
(GenBank) collagen triple helix repeat protein
Organism
shi
Slackia heliotrinireducens
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Reo_sigmaC_M
Motif
Other DBs
NCBI-ProteinID:
ACV22418
UniProt:
C7N683
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Position
complement(1599433..1601004)
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AA seq
523 aa
AA seq
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MFYPAAMCEAAGVVDASIMLSLGDDRYFSTRNFNIRVEKVLIDGLEPEDGFTLFVQAIAA
YENAADISTEAAEAANEAAEAANQAVSDLQDAAQRGDFDGADGADGFSPTATVTQTADGV
TITITDKNGTTTADVSKGAKGDKGDTGEQGPKGDKGDTGDRGPQGIQGETGPKGDKGDTG
ATGAQGPKGETGETGATGATGPKGPKGDTGAQGPQGIQGETGPKGETGATGAAGSDGVSC
THSWNGTVLSVTSASGTSSADLVGPQGPTGATGATGPAGADGTTFTPQNPLSLSNGELSV
DLSANTDTQHLAPTFWQKWTYPRHPDSEGRYWVSLGQDTSQGYRSYDMIFNGQYRELDVI
TMVSKNSGYASAILQRVAEFGLMRKFETTTDFDVDPGDTEAVTIPAGDFYSVPADCVFLN
TTTGNLMINTAEAAPASRIAATSLTVTGLCNIYDVAAAFTASSPLSLSNGVLSIDLSGYA
ALTGATFTGAVSGITPTADANFATKKYVDDAIAALDDLSNESF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtgttctacccggcagcgatgtgcgaggctgctggtgtcgtggatgcgagcatcatgttg
tcgctgggcgatgaccgctacttttccacgcgcaacttcaacatccgagtcgagaaggtt
ttgattgatggtttggaacccgaggatgggttcacgctgtttgtgcaggccattgcagca
tacgagaatgcagcggacatcagcacggaagccgctgaggcagccaatgaggcggcagag
gcggcaaaccaagccgttagcgacttgcaggatgccgcccagcgcggggatttcgatgga
gccgatggcgctgacgggttcagcccgactgccactgtgacgcagaccgccgatggcgtg
accattaccatcaccgacaagaacggcactacgacggccgatgtctctaaaggcgcaaag
ggagacaagggcgataccggcgagcagggtccgaaaggcgacaagggtgacaccggagat
cgtggacctcagggaattcagggtgagaccggacccaagggagataagggcgatacaggg
gctaccggtgctcagggacctaaaggcgaaaccggagaaacgggcgcaactggtgctaca
ggaccaaaggggccaaagggtgatacgggcgcacaggggccgcagggcatccagggtgaa
acaggtcccaagggcgaaaccggtgcgactggagcagccggcagcgacggcgtgagctgc
acgcattcgtggaatggaaccgtgctttccgtcacgagcgcatcgggcacgagctccgcc
gaccttgttgggccgcaggggccaaccggcgctacaggagctacgggtcccgctggcgct
gacggcacgacattcactccgcagaacccgctttcgctttcgaacggcgaactatccgtc
gatttatctgcaaacacggatacccagcatttagcgccgacgttctggcagaagtggact
tatccgcgccacccggacagcgagggccgctactgggtctcgctcgggcaggacacgagt
cagggataccgctcatacgacatgatcttcaacgggcaatatcgcgagctcgacgtgata
acgatggtgtcgaagaacagcgggtacgcgagcgcgatcctgcagcgcgtggccgagttc
ggtttgatgcgcaagttcgagacgaccaccgacttcgacgtagacccgggcgatacggag
gcggtgacgattcctgccggtgacttctactcggtgcccgccgactgcgtcttcctgaac
accacgacaggcaacttgatgattaacaccgccgaagcggctcccgccagcagaatcgcc
gcgacctctcttaccgtgacggggctttgcaacatatacgacgtggctgctgcattcacg
gcatcgtcgccgctttcgctctccaacggcgtgctctcgattgacctctccggttatgcc
gcgcttacgggtgccacattcactggggccgtttcgggtatcacaccgaccgctgatgcg
aacttcgccacgaagaagtacgtggacgacgccattgccgcacttgacgacctctcgaac
gaaagcttctga
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