Slackia heliotrinireducens: Shel_16340
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Entry
Shel_16340 CDS
T00981
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shi
Slackia heliotrinireducens
Pathway
shi03420
Nucleotide excision repair
shi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Shel_16340
03430 Mismatch repair
Shel_16340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_16340
Enzymes [BR:
shi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Shel_16340
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Shel_16340
MMR (mismatch excision repair)
Other MMR factors
Shel_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ACV22653
UniProt:
C7N6W8
LinkDB
All DBs
Position
complement(1834607..1836925)
Genome browser
AA seq
772 aa
AA seq
DB search
MLDIDSLNEPQREAVLCTEGPLLVLAGAGSGKTRVLTYRIAHMVQDLNVPPWQIMAITFT
NKAANEMRERLGRLVGPSARGMWVSTFHSMCVRILRVDCELLGFSKSFTIYDDDDTKRLL
KDVMAGLDLDPKRWPVNSIRGKISQAKNELKAPGVYADEARDPVSKVTARVYAVYQERLK
MANAFDFDDLLMYTYLLFKNHPDVLEAYQDRFRYLLVDEYQDTNHAQYAITKLLAAKHQN
IMVVGDDDQSIYSWRGADIRNILEFEQDYPQARSIKLEQNYRSSGNILNAANAVVAHNTK
RKQKRLFTESGDGEKILVYMASDERDEGRWIAGEIDKLHNEGVSYEEMAVFYRTNAQSRS
LEDMLLRAGVPYRIVGGTKFFDRAEIRDVIAYLTLCINPADDMAAKRVINQPRRGIGKTT
IEHIENVARNSNLTFMQAAEWCLADETLQMRTRNAIGGFVGLINDAQSYGGELRKVIEAV
IDRSQLIQALEQERTDEAESRIENIKEFLSVVDEYVESHEIDESALPPEGINLLADTRQL
SPDSLEDFLEWVRLRTDLDAATDDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSS
RDPQGLEEERRLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVGEIPSELRKSAGL
GSSGFAGTGWEKRGSRRGISGSGKEAGGGRVFGQSSAGGTRPRSYTGRTSPNAEKKSAAR
VTFAVGDIVDHKTFGRGRVTKVDGDTLHIKFSKGNVTKKLLKDYAPIVKINL
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgctggatatcgattcgctgaacgagccgcagcgcgaggccgtgctgtgcaccgagggt
ccgctcctggtgcttgcgggcgcaggcagcggcaaaacccgtgtgctcacgtaccgcatc
gcccatatggttcaggatctgaatgtgccgccttggcagattatggccatcaccttcacc
aacaaggccgccaacgagatgcgcgaacgtctcgggcgcctggtgggcccttcggcccgc
ggcatgtgggtgtccacgttccacagcatgtgcgtgcgcatcctcagggtcgattgcgag
ctgctcggcttctccaaaagcttcaccatttacgatgacgacgatacgaaacgcctgttg
aaagatgttatggcagggcttgacctggatcccaagcgctggccggtcaattctatccgc
ggcaagatctcccaggcgaaaaacgagctcaaggcgcccggcgtgtatgccgacgaggcc
cgcgaccccgtctccaaagtcacggcgcgcgtgtacgcggtgtatcaggaacgcctgaag
atggctaacgccttcgacttcgacgacctgctcatgtacacgtatctgctgttcaagaac
catcccgatgtgctggaggcctatcaggaccggttccgctacctgctggtggacgagtat
caggacacgaaccacgcccagtacgccattaccaagctgttggctgccaagcatcagaac
atcatggtggtaggcgacgacgaccagtccatttactcatggcgcggcgccgacatccgc
aacatcctcgagttcgagcaggactaccctcaggccaggtccatcaaactcgagcagaac
taccgcagctcgggcaacatcctgaacgctgccaacgccgtggtcgcgcataacaccaag
cgcaagcagaagcgcctgttcaccgagtcgggcgacggcgagaagatcctcgtgtacatg
gcgtccgacgaacgcgacgaggggcgctggatcgccggcgaaatcgacaagctgcataac
gaaggcgtctcatacgaggagatggccgtgttctatcgcacgaacgcgcagtcacgatcc
ttggaagacatgctgttgcgtgccggcgtgccgtaccgcatcgtgggcggaacgaagttc
ttcgaccgcgccgagatccgcgacgtcatagcgtacctcaccctgtgcatcaaccctgcc
gacgacatggcggccaagcgcgtcatcaaccagccgcgccgcggcatcggcaaaaccacc
atcgagcacatcgagaacgtggcccgcaattccaacctcacgttcatgcaggcggccgag
tggtgccttgccgacgagacgctgcagatgcgcacccgtaacgccatcggcggtttcgtg
gggctgatcaacgacgcgcagagctacggcggcgagctgcgcaaggtgatcgaggcggtt
atcgaccgaagccagctcatccaggccctggagcaggagcgaaccgacgaggccgaaagc
cgcatcgagaacatcaaggagttcctctccgtagtcgacgaatatgtggaaagccacgag
attgacgagagcgcccttcctcccgaagggatcaacctgctggcggacacgcgccagctt
tcgccggatagcttggaggacttcctggagtgggtgcgtctgcgcaccgatctggacgcc
gctaccgacgacgaccagttcgtcacgcttatgaccgtgcactcgtcgaagggtttggag
ttcgattgcgtcttcgtggccggcatggaagagaccctgttcccgcactccaattccagc
cgcgacccgcaagggttggaggaggagcgccgattggcctatgtcgccatcacccgcgcc
cgcaagcgcttgtatctgacctgcgcttacgcgcgtcagattttcggcgagacccatgcc
aaccccgtttcgcggttcgtgggcgaaattccctccgagctgcgcaagagcgcgggtctg
ggaagttccggcttcgcgggaaccggctgggagaagcgcggcagccgtcgcggcatctcg
ggcagcggcaaggaggccggcggcgggcgcgtcttcggacagtcgagcgccggcggaacg
cggccccgcagctacacgggacggaccagccccaacgctgagaagaaatccgccgcgcgg
gtcacgttcgccgtgggggacatcgtggaccacaaaaccttcggccgcggtcgcgtgacg
aaggtggacggcgatacgctgcacatcaaattcagcaagggcaacgtcaccaagaagctc
ctgaaggactacgcgcccatcgtgaaaatcaacctgtag
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