Slackia heliotrinireducens: Shel_22220
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Entry
Shel_22220 CDS
T00981
Name
(GenBank) predicted ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
shi
Slackia heliotrinireducens
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_22220
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Shel_22220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
AAA_22
ResIII
SLFN-g3_helicase
AAA_30
AAA_19
AAA
T2SSE
nSTAND_NTPase5
TrwB_AAD_bind
AAA_7
AAA_16
Zot
AAA_25
Hydrolase
AAA_6
CbiA
DUF5401
Motif
Other DBs
NCBI-ProteinID:
ACV23232
UniProt:
C7N110
LinkDB
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Position
complement(2459707..2461341)
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AA seq
544 aa
AA seq
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MYVDDKLLIAQGTEPVYLYPHMANRHGLIAGATGTGKTVTLKTIAQSMSDAGIPTFLADI
KGDVSGMAVPGQATEKLVARLAALGVYDYDFHACPVRFWDVFGEQGTPVRTTITEMGPVL
LARLLDLTDVQQGVLNIAFHVADDEGMLLLDLKDLRSMIAYLGENAQEYTTRYGQIAKTS
VGAIQRSLLELEDAGGEIFFGEPALELEDWLKCDEDGKGYVNILDCVKLAQSPLLYSTFL
LWMLSELYEMLPEAGDLDKPKMCFFFDEAHLLFDDAPKALLDKVEQIVKLIRSKGVGVYF
ITQNPADIPDEVLAQLGNRVQHALRAYTPAEQKSIKAAADSFRDNPDFDEREAITDLATG
EALISFLDADGKPSVVQRAKVIAPACSMDAAPDDDKRYIIDNGAFMPKYKTPIDRVSAYE
ILEKKAIAAAEEADRLAAEAEAEKLRLELEKQAEKERIAAEKEAARIQKEIEKEEAKRKA
AEEKEFARMVAEAERQRERELKAIEKEEAARRRDRERIANAALTSLSRTLGNGLARGLLG
VLKR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcgacgacaaactcctgattgcccagggcaccgagcccgtctatctgtacccc
cacatggccaaccgccacgggcttatcgccggcgccacaggtaccggcaagaccgtcacg
ctgaaaaccatcgcccaaagcatgagcgacgcgggtatcccaacgtttctcgcggatatc
aaaggcgacgtgtccggcatggccgtgcctggtcaggctacggaaaagctggtcgcccgc
ctggccgcgctgggcgtgtacgactacgatttccatgcgtgccccgtacgcttctgggac
gtgttcggcgagcaaggcacgccggtgcgcaccaccattacggagatggggccggtgctg
ctggcccgtctgctggatttgaccgacgtgcagcagggcgtgctcaacatcgccttccac
gtggcggacgacgaaggcatgctgctgctcgacctgaaggacctgcggtccatgattgcc
tacctgggcgagaacgcgcaggagtacaccacccgttacggccagattgccaagacgtcc
gtgggcgcaatccaacgttcgcttctggagctggaagatgccggcggcgagatattcttc
ggcgaacccgcccttgaactggaggattggctcaaatgtgacgaggacggcaagggctat
gtcaatatcctcgactgcgtgaagttggcccagtcgccgcttctgtactccacgtttttg
ctctggatgctctccgagctctatgagatgctgcctgaggcgggcgatttggacaagccc
aagatgtgcttcttcttcgacgaggcgcacctgctgttcgatgacgcgccgaaggccctg
ctcgacaaggtggagcagatcgtcaagctcattcgctccaaaggcgtgggcgtgtatttc
atcacccagaaccccgccgacatccccgatgaggtactggcgcagctgggcaaccgcgtg
cagcacgccctgcgcgcgtatacgccggcggagcagaagtccatcaaggccgccgcggac
agcttccgcgacaaccccgacttcgacgaacgcgaggccattaccgacctggcgacgggc
gaggcgctgatcagcttcctggatgccgacggaaagccgtcggtggtgcagcgcgcgaag
gtcatcgcgccggcgtgctccatggatgccgcgcccgacgacgacaagcgttacatcatt
gacaatggcgcgttcatgccgaaatacaaaacgccgatcgaccgtgtgagcgcctacgag
attttggagaagaaggccatcgccgcagccgaggaggcggaccgtctggctgccgaggcc
gaggcagaaaagctgcgtctggaattggagaagcaggccgaaaaggagcgcatcgccgcg
gagaaggaagccgcccgtatccagaaggaaatagagaaggaagaagccaagcgcaaagcc
gccgaggagaaggaattcgcccgcatggtggccgaggccgagcgccagcgcgaacgcgag
ctgaaggccatcgagaaggaagaggcggcccgccgcagggaccgcgagcgcatcgccaat
gcggcgcttacatccctcagccgcacgctgggcaacggcttggcccgcggcctgctcggt
gtgttgaagcgataa
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