Slackia heliotrinireducens: Shel_22720
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Entry
Shel_22720 CDS
T00981
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shi
Slackia heliotrinireducens
Pathway
shi03420
Nucleotide excision repair
shi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Shel_22720
03430 Mismatch repair
Shel_22720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_22720
Enzymes [BR:
shi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Shel_22720
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Shel_22720
MMR (mismatch excision repair)
Other MMR factors
Shel_22720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACV23282
UniProt:
C7N160
LinkDB
All DBs
Position
2517579..2519429
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AA seq
616 aa
AA seq
DB search
MQRLDMEQALAAATATMRVTAPVGAGKTEFLIRHACALVQNGLRPSSICLVVNSEMAKLA
AKRRLSQTSAAGVRITTARELALQVLSLPEARTVIGRSPRAATKQEVSFILTDLRLTGID
SNTLRKVVADPTAKPDSPDGQRARDVLFDLLKRYDILLDCEVAPSAVQALGSLAEVPERL
RFQAVLVDDYQNLSAASQALCEMMARERFVVAGNADQFIDGFDTNPNPRGLTDFETGRPD
AASIELEAPDTAYPRIRAFAQAALTQDSSAFDRLVESGAVEPDDDHAVLVKWRTPADEMA
NLPDVVRRLLAAEEGLVPRDLCIVTPNHTWTRSALKMFKRAKIAATAAQGNDPLRGDPRR
QDASGMLEAFVRAHLLADRNDLMAWRMWLGLGRRDLASKDFAALADAAQDHAAELAAMLN
GNAELSADTPPELRARIAEGRALIARSAEKQGYSLIMACMPELDEDFESLVGELKGSETA
AELAATLRKHVFSPVVSADPACVVITPYRQLQGLSPKAIVVLGAVEGLMPAAAQLDGERQ
AQAARRLFCNAVGKAQNRLVVSTFQKAPAAFAEQFRLVEKRRKAERGQTMAMLARTRFVD
DAGNAAPPSQSGEQFV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgactcgacatggagcaggcccttgcagccgcgacggccacgatgcgcgtgacc
gcacccgtcggagccggcaagacggagtttctgatccgccacgcctgtgcgcttgtgcag
aacggcctgcgccccagcagcatctgccttgtggtcaactccgaaatggccaagcttgcc
gccaaacgccgcctgtcgcagacctcggcggcaggcgtgcgcatcaccacagcccgggag
cttgccctgcaggtcctgtcgctgcccgaggcccgcaccgtcatcggccgcagccctcgc
gcggctaccaaacaagaggtctccttcatcctgaccgacctgcgccttacgggcatcgat
tcgaatacgctccggaaagtcgtggccgatccgacggcgaagccggactcccccgatggg
caacgcgcccgcgatgtcctgttcgacctgttgaaacgctacgacatcctactcgattgc
gaagttgcgccctcagccgttcaggcgctcgggtctttggccgaggtgccggagcgcctg
cggttccaggcggtactcgtcgacgattatcagaatctgtctgccgcatcgcaggccctg
tgcgaaatgatggcccgcgaacgtttcgtcgtcgctggcaacgcggaccagttcatcgat
gggttcgacacgaaccccaacccccgcggtctcacggatttcgaaacgggcaggcccgat
gccgcaagcatagagcttgaagcgccagacaccgcctatccgcgcattcgggcctttgcg
caggccgccctcactcaggactcgtccgcgttcgacaggcttgtcgaatcgggggcggtc
gagcccgacgacgaccatgcggtcctggtcaaatggcggacgcccgcagatgagatggcg
aacctgcccgatgtggtgcgccgcctgctggccgccgaggagggccttgtgcctcgcgac
ctatgcatcgtcacgccgaaccacacctggacgcgaagcgccctcaaaatgttcaagcgc
gcgaaaatcgccgccaccgccgcccaaggcaacgaccctttgcgcggcgacccccgcagg
caggacgcaagcggcatgctggaggcgttcgtgcgcgcccatctgctggcagacagaaac
gacctgatggcatggcggatgtggttgggccttggcaggcgcgacctggccagcaaggac
ttcgccgccctggcggatgccgcgcaagaccacgccgccgaacttgcggccatgctgaac
gggaatgccgagctgtccgccgacacgccgcctgaactgcgcgcacgcattgccgaagga
cgcgctcttattgcgcgatccgccgaaaagcagggctactcgctcatcatggcctgcatg
cccgaactggacgaggacttcgaaagcctggtgggtgagctgaagggttccgaaaccgcc
gccgagctggcggcgacgctgcgaaagcacgtcttctccccggtcgtgtccgccgacccg
gcttgcgtcgtcatcactccctaccggcagctgcaaggcctgagccccaaggcgatcgtg
gtcctgggggcggtcgaaggcctcatgcccgccgccgcgcagctcgacggcgagcgccag
gcgcaagccgcacgccgcctgttctgcaacgctgtcggcaaggcgcaaaaccgcctggtc
gtatccactttccagaaggcaccggccgcattcgccgaacagttccgcctggtggagaaa
cgccgcaaggcagaacgcggccagaccatggccatgctcgcccgcacccggttcgtcgac
gacgcgggaaacgcggccccgcccagccaaagcggcgagcagttcgtctaa
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