Slackia heliotrinireducens: Shel_22770
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Entry
Shel_22770 CDS
T00981
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shi
Slackia heliotrinireducens
Pathway
shi03420
Nucleotide excision repair
shi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Shel_22770
03430 Mismatch repair
Shel_22770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_22770
Enzymes [BR:
shi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Shel_22770
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Shel_22770
MMR (mismatch excision repair)
Other MMR factors
Shel_22770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
ACV23287
UniProt:
C7N165
LinkDB
All DBs
Position
complement(2526254..2528209)
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AA seq
651 aa
AA seq
DB search
MVLEFPRVPAVKLFEGGCKTGKTQKLALEVAALLDQGVSAEDILVVVAQPEAVEPTRRLL
AFSSQGASQFVGVRTARELAMSVLATPGACAATGRKPRQLARYEESFLMEDMKVSGLRPK
RIAELTGFFYRSWTELADFEEGWLIYKEEEENHAQLKRLLGLYGAYIEPEISNMAFRFLS
ECPAELAKAQFKYVFADDYQMLSRASQYLVCALAGEKLFAAGNPLACVQVFDSFPYAKGI
DELKAQVPQADVVMLSESHLPTDTAAAVGSLSELAAEHPDFEGMEIPVTMANGTQVDGGF
EIIETATPAEECERVIEWVQARLSEGLSPEDVAVVVPNKTWELNVLVRLLDRGVAASSVG
TRGNIGGDVRFEKSCLPAQTACLLTLAADPGDEPSLRAWCGFGDELTCRSAFTEVYTCME
SVGLSMDEALAVLSRSLQGGDLPEGVAPVVYGNEMRKAADRYELLQEHLEHLRPLEGYML
KSAATKLVCGPAASVGSTIDDLFSEDMFDESAAAMLKNAHANMFYPATHPIPYVKVVTRE
RVIGMNPKAVVFMGMVNGLSPKHAYFDRTKTSPEQARKMLAGDARIYMAALSKGMQRAAM
TYFTTARGTDAERQGLRVERFYAQDGERHARLSKSLVLNCIKGEDIPEVYF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggttttggaatttccccgcgtacccgccgtcaagcttttcgaaggcggatgcaagacg
ggtaagacgcagaagctcgccttagaggtggcggccctgctggatcagggcgtttccgca
gaagacatcctggtcgtcgtggcgcagcctgaagccgtggagcccacccggcgtctgctg
gccttctccagccaaggcgcttcgcagttcgtcggcgtgcgcaccgcccgcgaactggcc
atgtccgtgcttgcgacgcctggggcctgcgctgccaccggccgaaaacctcggcagctt
gcgcggtatgaggaaagcttcctcatggaggatatgaaggtgagcggactgcgtcccaag
cgcatcgccgagctgacgggtttcttctaccgcagctggaccgagctggccgatttcgaa
gagggctggcttatatacaaagaggaggaagagaaccacgcgcagctcaaacgcctgctg
ggcctgtatggcgcctacatcgagccggagatttccaacatggcgttccgattcctgtcc
gaatgtcctgccgagttggcgaaagcgcagttcaagtacgtgttcgcggatgactaccag
atgctgagccgtgcgtcgcagtatctggtctgcgcgcttgccggcgagaagcttttcgcg
gccggcaatccgctggcctgcgttcaggtgttcgacagcttcccctatgccaaaggcatc
gacgagctgaaggcccaggtgcctcaggcagacgtggtcatgctgtcagaaagccacctg
ccgaccgacacggcagcggcggtcggcagcctttcggagcttgccgccgagcatcccgat
ttcgaggggatggagattcccgtcacgatggcgaacggtacgcaggtcgatggcggtttc
gagatcatcgaaaccgcaacacccgccgaagagtgcgagcgcgtgatcgagtgggtgcag
gcgaggctcagcgaagggctcagtcccgaggatgtcgctgtggtggttcctaacaagacc
tgggagctcaacgttctggtgaggctgctcgaccggggcgtcgccgcgagcagcgtaggt
accaggggcaacatcggcggtgacgtgcgcttcgaaaaatcctgtctgccggcgcagacg
gcctgcctgctgacgctggccgcggacccgggcgacgaaccgtcgcttcgtgcgtggtgc
ggattcggggacgagctgacctgccgctcggcgttcacggaggtgtatacttgcatggaa
tccgtcggcctttccatggacgaggcgctggcggttctttcccgcagcctgcagggcggc
gaccttcccgagggcgttgcacctgtggtgtacggaaacgagatgcgcaaggctgctgat
aggtacgagttgcttcaggagcatcttgagcatctgcggccgcttgagggttatatgctg
aagtcggcggcgacaaagctggtttgcggtcccgctgcgagcgtgggctcgactatcgac
gacctgttcagcgaggatatgttcgacgaatctgcggccgccatgctgaaaaacgcacac
gccaacatgttctatccggctacacaccccataccctacgtcaaggtggtgacccgcgaa
cgcgtcatcggcatgaacccgaaggccgtggtgtttatgggaatggtgaacgggctgtcc
cccaaacatgcgtatttcgaccgcacgaaaaccagtcctgagcaggcccgaaagatgctt
gccggcgacgcgcgcatatacatggccgccctttccaagggcatgcagcgtgcggccatg
acgtacttcaccacggcgcgcgggaccgacgccgagcggcaaggcttgcgcgttgagcgc
ttctacgcccaagacggcgagaggcatgcccgtctttccaagagcctggtgctgaactgc
atcaaaggggaggatattcccgaggtgtacttctaa
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