Slackia heliotrinireducens: Shel_25000
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Entry
Shel_25000 CDS
T00981
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shi
Slackia heliotrinireducens
Pathway
shi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Shel_25000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shi03019
]
Shel_25000
03110 Chaperones and folding catalysts [BR:
shi03110
]
Shel_25000
03029 Mitochondrial biogenesis [BR:
shi03029
]
Shel_25000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shi04147
]
Shel_25000
Enzymes [BR:
shi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Shel_25000
Messenger RNA biogenesis [BR:
shi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Shel_25000
Chaperones and folding catalysts [BR:
shi03110
]
Heat shock proteins
HSP60 / Chaperonin
Shel_25000
Mitochondrial biogenesis [BR:
shi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Shel_25000
Exosome [BR:
shi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Shel_25000
Exosomal proteins of other body fluids (saliva and urine)
Shel_25000
Exosomal proteins of breast cancer cells
Shel_25000
Exosomal proteins of colorectal cancer cells
Shel_25000
Exosomal proteins of bladder cancer cells
Shel_25000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACV23507
UniProt:
C7N2J9
LinkDB
All DBs
Position
complement(2765159..2766802)
Genome browser
AA seq
547 aa
AA seq
DB search
MPTVYGGDARNGMLAGVNALADAVRVTLGPRGRNVAMPQKANLYGADYGDAAAPDAPVLI
TNDGVTIAKSVVLPDPLENMGAQLCKEAAIKANDTAGDGTTTAVVLTQALMENAFRMVAA
GSDPLALRRGVQMVCDAAVEHLRKVAIPVETQDDLARVATISCQDEKLGAMVGEALYKVG
LEGVVNVDDSRRLETELDLACGIVFDRGYTSPHMITDKSQLTAVLDRPYILLTDKKISAK
DDILPALICAAEDDRDCLIVCDGLEGEALALVLGNNQAGDMNTAAVIAPAYGEGRLWRLD
DLAIQTGGTAIVETAGMSLRDVTRTELGSAERVVITKNRTSIEGGGGDPQAIADREAQLR
YYAENTEYEFNRKRHEERLAAFVSGVATIRVGGMTEAEQWERKMRVEDAVNAARAAYEEG
VVAGGGLALLNAAQELSGLVESLEGDERAGAAIGVAALGAPVRQIAENAGKNGAAVLAKL
EEQPAGIGYNAATDAFEDLMAAGILDPVRVTRSALEAAFSVAGTALLTEAGVTLKDSARK
GDANGDE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcctacggtctatggaggcgacgcacgtaacggaatgctggcgggcgtgaacgcgctg
gccgatgccgtgcgggtgacgctcggtccccgcggtcgcaatgtcgccatgcctcagaaa
gcgaacctgtacggcgccgattacggcgatgcggccgcccctgacgccccggtgctcatc
accaacgacggcgtgaccatcgccaaaagcgttgtgctgcccgatccgctggagaacatg
ggcgcgcagctgtgcaaagaggccgccatcaaagcgaacgatacggcaggcgacgggaca
accaccgccgtcgtcctaacgcaggccctgatggaaaacgcattccgcatggtggccgca
gggtccgacccactggctttgcgccgcggcgtgcagatggtatgcgatgctgcggtcgag
caccttcggaaagtggcgattcccgttgaaacccaggacgacctggcccgcgtggcgacc
atctcctgccaggacgaaaagctgggtgccatggtcggcgaggccctgtacaaggtaggg
ctggaaggcgtcgtgaacgtggacgactctcgccgattggaaaccgaactggaccttgcc
tgcggcatcgtgttcgaccgcggatacacctcgccgcacatgattaccgacaaatcccag
ctcacggcagttttggaccgtccttatatcctgctgaccgacaagaagatctcagccaaa
gacgacatcctgcctgcgctcatttgcgctgccgaagacgaccgcgactgcttgatcgtc
tgcgacggtctggaaggcgaagcgctggcgctggtgctgggcaacaaccaggcaggcgac
atgaacacggcggcggtcattgcgccggcgtatggcgaaggccgcctgtggcgccttgat
gacctggccattcagaccggcggcacggcaatcgtcgaaaccgcaggcatgagtttgcgc
gacgtgacccgtaccgagctgggcagcgccgagcgcgtggtcatcacgaagaaccgcacg
tccatcgaaggcggcggcggagacccgcaggccatcgccgatcgcgaggcgcagcttcgc
tattatgccgaaaacaccgaatacgagttcaaccgcaagcgccatgaagaacgcctggcc
gcattcgtatcgggagtggctaccatccgcgtaggcggtatgaccgaagccgagcagtgg
gaacgcaagatgcgcgtggaagacgcggtcaacgcggcccgcgcagcctacgaggagggc
gtggtcgccggcggcggtttggcgttgctgaatgcggcgcaagagctgtcgggcctggtg
gaaagcctggaaggtgacgagcgtgccggagctgccatcggcgtggcggcgctgggcgca
cccgtccgccagattgcggaaaacgccggcaagaacggtgcggccgtgctggcgaagctg
gaagagcagcccgcaggcatcgggtacaacgcggcgacggacgccttcgaggatttgatg
gcggcaggcatcctggatcctgtgcgcgtgacccgcagcgccctggaagcagcgttctcc
gtagcgggaacggccctgctcacagaggcaggcgtgaccctgaaggacagcgctcgcaaa
ggcgacgcgaacggagacgaatga
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