Shigella sp. PIB: LXH19_00565
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Entry
LXH19_00565 CDS
T10707
Name
(GenBank) YadA-like family protein
KO
K21449
trimeric autotransporter adhesin
Organism
shig Shigella sp. PIB
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shig02000
]
LXH19_00565
Transporters [BR:
shig02000
]
Other transporters
Pores ion channels [TC:
1
]
LXH19_00565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
USJ82253
LinkDB
All DBs
Position
complement(125645..131374)
Genome browser
AA seq
1909 aa
AA seq
DB search
MNKIFKVIWNPATGSYSVASETAKSRGKKSGRSKLLISALVAGGLLSSFGASADNYTGQP
TDYGDGSAGDGWVAIGKGSKANTFINTSGASTALGYDAIAEGEYSSAIGSKTLASGGASM
AFGVSAKALGDRSVALGASSTATGDRSMALGRYAKTNGFTSLAVGDSSLADGEKTIALGN
TAKAYEIMSIALGDNANASKEYSMALGASSAASAANAIAVGRNSAAAGVDSLALGRQSLA
SAANAITIGAESEAAENATAVGTKAKARGKNSLALGANSDSTGEGSVALGYTAAAAGASA
LALGQNAQASNTNTIALGQNSSASTANAIAIGTGSSAVGSNSLALGSSSSAGGNNSVAIG
ASSTADEDNVVSVGSGSAQRRIVNMAAGEISTDSKEAINGSQLYAISRSVADRLGGGADV
ASNGTIKGMSYKLKKRDFNNVGEALQYLDNETLHWDSAKGAFSASYIVKNADGTIASTVA
ENKIINVKDGDISATSKDAINGSQLKTTNDNVATNTTNITNLTDSVGDLKDDALLWNGTA
FSAAHGTDATSKITNVKDGDLTAGSTDAVNGSQLKTTNDAVAANTTNIATNTTNITNLTD
AVDSLGDDSLLWNATAGAFSAAHGTDATSKITNVKDGDLTAGSTDAVNGSQLKTTNDAVA
ANTTNIATNTTNITNLTDAVDSLGDDSLLWNDAAKAFSAAHGTDATSKITNVKDGDLTAG
STDAVNGSQLKTTNDAVAANTTNIATNTTNITNLTDAVDSLGDDSLLWNATAGAFSAAHG
TDATSKITNVKDGDLTAGSTDAVNGSQLKTTNDAVTANTTNIATNTTNITNLTDAVDSLG
DDSLLWNDAAKAFSAAHGTDATSKITNVKDGDLTAGSTDAVNGSQLKTTNDAVAANTTNI
ATNTTNITNLTDAVDSLGDDSLLWNATAGAFSAAHGTDATSKITNVKDGDLTAGSTDAVN
GSQLKTTNDNVATNTTNIATNTTNITNLTDAVDSLGDDSLLWNATAGAFSAKHGTNGTDS
KITNLLAGTVSSDSTDAINGSQLYGLADSFTSYLGGGADISDAGVLTGPTYTIGGTDYNN
VGDALAAINTSFSTSLGDALLWDATAKGGDGAFSAGRGKDNTASIITNVADGAISSTSSD
AINGSQLYDTSKYIADTLGGDAEVNADGTITAPTYAIAGGSYSNVGDALEAIDTTLDDAL
LWDATANDGNGAFSAAHGKDKTASVITNVANGAISATSSDAINGSQLYTTNKYIADALGG
DAEVNADGSITAPTYTIANAEYNNVGDALDALDDNALLWDATANDGAGAYNASHDGKASI
ITNVADGNIGEGSTDAINGSQLFNTNMLIQQNSEIINQLAGNTSETYIEDNGAGINYVRT
NDNGLAFNDASASGIGATAVGYNAVASGESSVAIGQGSSSSVDTGIALGSSSVSSRVIVK
GSRDTSVSEEGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVRQLQNAI
GAVATTPTKYFHANSTAEDSLAVGEDSLAMGAKTIVNGDAGIGIGLNTLVLTDAINGIAI
GSNASANHANSIAMGSGSQTTRGAQTDYTAYNMDAPQNSVGEFSVGSEDGQRQITNVAAG
SADTDAVNVGQLKVTDERVAQNTQSITNLNNQVTNLDTRVTNIENGIGDIVTTGSTKYFK
TNTDGVDANAQGKDSVAIGSGSIAAADNSVALGTGSVANEENTISVGSSTNQRRITNVAA
GVNATDAVNVSQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGGTTRISNVSAGVNNNDA
VNYAQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAMTGLPQAYTPGASMAS
IGGGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAALGAGIQW
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatttttaaagttatctggaatccagcgacgggcagttacagcgttgccagc
gaaacggcgaagagccgtggcaaaaagagcggacgcagtaagctgttaatttctgcgctg
gttgcgggtgggctgttgtcgtcgtttggggcaagtgcagataattacactgggcagcca
actgattatggcgatggctcagcaggtgacggctgggttgctatcggtaaaggttcaaaa
gcaaatacctttataaacacaagtggcgcgagtacagctttaggttatgacgcgatagcc
gaaggtgagtacagctctgccatcgggtcaaaaaccctcgcaagtggtggagcatccatg
gcgtttggggttagtgcaaaagcattaggtgacagaagtgtcgcgctgggtgcatcttca
acagcaactggcgatcgttcgatggctcttggtcgttacgcaaagacgaacggttttaca
tctcttgctgttggggactcctcccttgccgatggtgaaaaaactattgcgttaggaaat
acggctaaagcttacgaaattatgagcatcgccctcggtgataatgccaatgcgtcaaaa
gaatattcaatggcgctgggtgcaagtagcgccgcatctgcggctaacgcgattgcagta
ggccgcaacagtgctgctgctggcgtagacagcctcgcattaggtagacaatcacttgcc
agtgcagcgaacgccattacgattggtgctgaaagcgaagccgctgaaaatgcgacggct
gtaggtactaaagcgaaagctcgaggcaaaaacagtcttgcattaggtgcaaacagtgat
tcaacaggtgaaggttctgttgccctgggatatacagcagcggctgctggcgcaagtgct
cttgccttggggcaaaatgcgcaagcatcaaacacaaacaccattgcattaggccagaac
agcagcgcatcaaccgcaaatgctattgcgatcggtacaggaagttctgcggttggatca
aacagtcttgcattgggaagttcatcttctgcaggagggaataattccgtcgcgattggt
gcaagctctactgcagatgaagacaacgttgtgtcggtcggctcagggtcagcacagcgt
cgcatcgtcaatatggcggcaggtgaaatctcaacagacagtaaagaagccattaacggt
tcacaactttacgccattagtcggtcggtagcagacaggctgggaggcggagcagatgta
gccagtaacggaacaataaaggggatgtcttataaactgaagaaaagggatttcaataac
gttggtgaagcactccagtaccttgacaatgaaactctgcactgggactcagctaaaggg
gctttcagcgccagttatattgttaaaaatgctgatggaacgattgccagtaccgtagca
gaaaacaaaatcatcaatgtaaaagatggcgatatttcggctaccagtaaagacgccatt
aacggctctcagctgaaaaccaccaacgataacgtagcgaccaacaccaccaatatcacc
aacctgactgattccgttggcgaccttaaagacgatgccctgctgtggaatggcaccgca
ttcagcgccgctcacggtaccgatgccaccagcaaaatcaccaacgtcaaagacggtgac
ctgacggctggcagcactgacgcggtaaacggctctcagctcaaaaccactaacgatgcc
gtggcagccaacaccaccaatatcgccacgaacaccaccaacatcaccaacctgactgac
gctgttgacagtctcggtgatgactctctgctgtggaacgctactgcgggggcattcagt
gccgcgcacggtactgatgccaccagcaaaatcactaacgtcaaagacggtgacctgacg
gctggcagcactgacgcggttaacggctctcagctcaaaaccactaacgatgccgtggca
gccaacaccaccaatatcgccacgaacaccaccaacatcaccaacctgactgacgctgtt
gacagtctcggtgatgactctctgctgtggaatgatgcagcgaaagcattcagcgccgcg
cacggtactgatgccaccagcaaaatcaccaacgtcaaagacggtgacctgacggctggc
agcaccgacgcggttaacggctctcagctcaaaaccactaacgatgccgtggcagccaac
accaccaatatcgccacgaacaccaccaacatcaccaacctgactgacgctgttgacagt
ctcggtgatgactctctgctgtggaacgctactgcgggggcattcagtgccgcgcacggt
actgatgccaccagcaaaatcactaacgtcaaagacggtgacctgacggctggcagcact
gacgcggttaacggctctcagctaaaaaccactaacgatgccgtgacagccaacaccacc
aatatcgccactaacaccaccaacatcaccaacctgactgacgctgttgacagtctcggt
gatgactctctgctgtggaatgatgcagcgaaagcattcagcgccgcgcacggtactgat
gccaccagcaaaatcactaacgtcaaagacggtgacctgacggctggcagcactgacgcg
gttaacggctctcagctcaaaaccactaacgatgctgtggcagccaacaccaccaatatc
gccacgaacaccaccaacatcaccaacctgactgacgctgttgacagtctcggtgacgat
tccctgctgtggaacgctacggcgggggcattcagtgccgcacacggtactgatgccacc
agcaaaatcactaacgtcaaagacggtgacctgacggctggcagcactgacgcggttaac
ggctctcagctcaaaaccaccaacgataatgtggcaaccaacaccaccaatatcgccacg
aataccaccaacatcaccaacctgactgacgctgttgacagtctcggtgatgactctctg
ctgtggaacgctacggcgggtgcattcagtgccaaacacggcaccaacggtactgacagc
aaaatcaccaacttactggcaggcactgtatcctctgatagcactgacgccattaatggc
tcacaactttatggcttagctgattcatttacgtcataccttggcggtggtgctgatatc
agtgatgcgggtgtattaaccgggccaacctacactattggtggtactgactacaataac
gtcggtgatgctctggctgccattaacacgtcatttagcacatcactcggtgatgcccta
ctctgggatgcgaccgccaagggcggtgacggtgcgtttagcgccggtcgcggaaaagat
aacacggccagcatcattactaatgttgcagacggtgcaatttcctctaccagcagcgac
gctattaacggctcacagctctatgacaccagcaagtacattgccgatactctgggtggt
gacgcagaagtcaatgctgacggcacaatcaccgcaccgacttatgccatcgctggcggc
agttacagcaacgtcggtgacgcgctggaagcgatcgataccacgctggatgacgctctg
ttgtgggatgcaacagccaatgatggcaatggtgcatttagcgccgctcacggaaaagat
aaaacagccagtgtaatcactaacgtcgctaacggtgcaatctctgccaccagcagcgat
gccattaacggttcacaactgtataccaccaacaagtacattgccgatgccctgggtggt
gacgcagaagttaacgctgatggttctattactgcgccgacttacaccattgcaaatgcc
gagtacaacaacgtcggtgacgccctggatgcgctcgacgataacgctctgctgtgggat
gcaacagccaatgacggcgcaggtgcctacaacgccagccatgacggcaaggccagcatc
atcacaaatgttgctgatggtaacattggcgaaggcagcactgacgccatcaacggttct
cagctgtttaacaccaatatgctgatccagcagaacagcgaaatcatcaatcagcttgcc
ggtaacaccagcgaaacctacatcgaagataacggtgcgggcattaactatgtacgtacc
aacgacaacggcttagcgttcaacgatgccagcgcttcaggtattggcgctacggctgtg
ggttataacgctgtcgcctcaggcgaaagcagcgtagccattggtcaaggtagcagcagc
tccgttgatacgggtatcgccctgggtagcagttccgtttccagccgtgtaatagttaaa
ggttctcgtgacaccagcgtgtcggaagaaggtgttgtgattggttatgacaccacggat
ggcgaactacttggtgcgttgtctattggtgatgacggtaaatatcgtcaaatcatcaac
gtagccgatggttccgaagcccatgacgccgttacggttcgccagttgcaaaatgccatt
ggtgcagtcgctaccacgccgaccaaatacttccacgctaactcaacagctgaagattca
ctggctgtcggtgaagactcgctggcaatgggtgcgaaaaccattgttaatggtgatgca
gggatcggtattggcctgaacactctggtgttaactgatgcaatcaacggtattgctatc
ggtagcaacgcgagtgcaaatcatgcaaacagtattgcgatgggtagtggttcccagacc
acccgtggtgcgcagactgactacaccgcctacaacatggacgcgccgcagaattctgtc
ggtgaattctctgtcggcagcgaagacggtcaacgtcagatcaccaacgtcgcggctggt
tcagcggataccgatgcggttaacgtaggtcagttgaaagtcactgatgagcgcgtagcg
caaaatacccagagcattactaacctgaacaatcaggtgacgaatctggatactcgcgtt
accaatatcgaaaacggcattggcgatatcgtaaccaccggtagcaccaaatacttcaag
accaacaccgatggcgtagatgccaacgcgcagggtaaagatagtgttgcgattggttct
ggttccattgctgccgctgacaacagcgtcgcgctgggtaccggttccgtggccaacgaa
gaaaacaccatctctgtgggttcttctaccaaccagcgtcgtatcaccaacgttgctgca
ggtgttaatgccaccgatgcggttaacgtttcgcagctgaagtcttctgaggcaggcggc
gttcgttacgacaccaaagctgatggttctatagactacagcaacatcactctcggtggt
ggtaatggcggtacgactcgcatcagcaacgtctccgctggcgtcaacaacaacgacgca
gtgaactatgcgcagctgaagcaaagcgtgcaggaaacgaagcaatataccgatcagcgg
atggttgagatggataacaaactgtccaaaaccgaaagcaagttgagcggtggtatcgct
tctgcaatggcaatgaccggtctgccgcaggcttacactccaggtgccagcatggcctct
attggtggcggtacttacaatggtgaatcggctgttgctttaggtgtgtcgatggtgagc
gccaatggtcgttgggtctacaaattacaaggtagtaccaatagccagggtgaatactcc
gccgcgctcggtgccggtattcagtggtaa
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