Shigella sp. PIB: LXH19_01010
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Entry
LXH19_01010 CDS
T10707
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
shig Shigella sp. PIB
Brite
Enzymes [BR:
shig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LXH19_01010 (hmsP)
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NCBI-ProteinID:
USJ82330
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Position
227334..229322
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AA seq
662 aa
AA seq
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MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA
ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI
SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR
LILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE
NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV
EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC
SIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQQRLTEESDILNAL
ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL
EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPED
SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE
EK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagtcgctcgttaacaatcaagcagatggcaatggtggcagccgttgtcctg
gtgttcgtttttattttttgcaccgttttgctgttccatctggtccagcagaatcgctat
aacacggctacgcaactggaaagcattgctcgctctgtccgcgaacccttatcttcagct
attttgaaaggcgatattcccgaagcggaagctattcttgccagcattaaaccggcaggc
gtggtcagccgtgccgatgtagtgctgcctaaccagttccaggcgctgcgtaaaagtttt
attccagagcgtccggtgccggtaatggttactcgcctgtttgagctaccggtgcaaatc
tcgctgggcgtctactcgctggaacgtccggcaaatccgcagccaattgcctatctggtg
ctacaggcggattccttccgtatgtataagttcgtgatgagtaccctctcaacgttagtg
accatttacttacttttgtcgttaatattgaccgtggcgattagctggtgcattaaccgc
ctgattttgcatccgttacgcaatattgctcgtgaacttaacgccatcccagcccaggag
cttgttggtcaccaactggcattaccacgtctgcatcaggacgatgaaatcggtatgctg
gtgcgcagttacaacctcaatcagcaattgctgcagcgccattatgaagaacagaacgaa
aacgcgatgcgcttcccggtgtcggatttgccgaataaagccttgctgatggagatgctg
gagcaggttgtcgcgcgtaaacaaaccaccgcgctgatgatcatcacctgtgaaaccctg
cgtgatactgcgggcgtgctgaaagaggcgcaacgagaaattctgctgctgacgctggtg
gaaaaactcaaatcggtactgtcgccacgtatgatcctcgcgcagattagtggttatgac
tttgctgtcattgccaatggtgtacaggaaccgtggcacgcaatcactttaggtcagcaa
gtgctcactatcatgagcgagcgcctgccgattgaacgtattcaactccgtccgcactgt
agcattggcgtggcgatgttctacggcgatctcaccgccgaacagctttatagccgcgct
atttctgcggcatttaccgctcgccataaaggcaagaatcagattcagttctttgatccg
cagcagatggaagccgcccaacagcggttgacggaagagagcgatatccttaatgcactg
gaaaatcatcagtttgcgatttggttacagccacaggtcgagatgacaagcggtaaactg
gtcagtgcggaagtgttactgcgtatccagcaaccggatggcagttgggatctgccggat
ggcttaatcgatcgcattgagtgctgtgggctgatggttaccgttggtcactgggtgctg
gaagagtcctgtcgactgctggctgcctggcaagagcgcggcattatgctgcccttgtcg
gtaaacctctcagcgctgcaactgatgcacccgaatatggtggcggatatgctggaactg
ttaacccgctatcgcattcagccgggaacactgattctggaagtgacagaaagccgacgt
attgacgaccctcatgctgcggtggcaatcctccgtccgctgcgcaatgccggagttcgg
gtggcgctggatgatttcggcatgggctacgcagggctgcgtcagctgcagcatatgaaa
tcgttgccaatcgacgtgttaaaaatcgacaaaatgtttgttgaaggcttgccggaagat
agcagcatgattgctgcaattatcatgttggcgcaaagcctgaacttacaaatgattgcc
gaaggcgtggagactgaagcacaacgcgactggctggcaaaagcgggcgttggtattgcc
cagggcttcctttttgctcgcccactccctattgaaatcttcgaagagagttacctggaa
gaaaagtag
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