KEGG   Shigella sp. PIB: LXH19_01820
Entry
LXH19_01820       CDS       T10707                                 
Symbol
hofQ
Name
(GenBank) DNA uptake porin HofQ
  KO
K02507  protein transport protein HofQ
Organism
shig  Shigella sp. PIB
Brite
KEGG Orthology (KO) [BR:shig00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shig02044]
    LXH19_01820 (hofQ)
Secretion system [BR:shig02044]
 Type II secretion system
  Type IVa pilus homolog protein
   LXH19_01820 (hofQ)
SSDB
Motif
Pfam: Secretin Secretin_N STN type_II_gspD_N0 DUF3394
Other DBs
NCBI-ProteinID: USJ82483
LinkDB
Position
407441..408679
AA seq 412 aa
MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL
HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNDNIARQEAEQARAQANLPLENR
NITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNNTALSALEQWVAQMDLPVGQ
VELSAHIVTINEKSLRELGVKWTLADAQQAGGVGQVTTLGSDLSVATATTHVGFNIGRIN
GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA
VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL
GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgaagcaatggatagccgcactactgttgatgctgatacccggcgtacaggcggcaaag
ccgcaaaaagtgacgctgatggtggatgacgttccggtagctcaggtgttgcaggcgctg
gctgaacaggagaagttgaacctggtggtgtcgccagacgtcagcggtacggtgtcgtta
catctaacagatgttccctggaagcaagcactacaaactgtagtgaaaagcgccggactg
ataacgcgccaggagggcaacattctctcagtgcattccattgcctggcagaatgacaat
atcgcccgtcaggaagcggagcaggcgcgggcgcaggcaaatctgccgctggaaaatcgc
aatattactctgcaatacgccgacgccggagagctggcgaaagctggggagaagctactg
agtgccaaagggagtatgaccgtcgataaacgcaccaatcgccttttgctacgagataac
aacacggcgttaagtgcccttgaacagtgggtagcgcaaatggatctgccggtcgggcag
gttgagctgtcggcgcatattgtcaccattaatgaaaaaagtttgcgtgagttaggcgtg
aaatggacgctggccgatgcgcaacaagctggtggcgttgggcaagtcaccacgcttggt
agcgacctctccgtagcgacggcgacaacgcatgtcggttttaacattgggcgcatcaac
ggacgtttgctggatcttgagctttccgcgctcgaacaaaaacagcagctggatattatc
gccagtccgcgtctgctggcctcacatcttcagcctgccagcattaaacaggggagcgaa
attccatatcaggtttccagcggggaaagtggcgcgacgtcggtggaatttaaagaggcc
gtcctggggatggaggtcacgcccacggtgttacaaaaaggtcgcatccggctgaaatta
cacatcagccagaacgttccggggcaggtgctacagcaggccgatggcgaagtgctggcg
attgataagcaggagatcgaaacgcaggtcgaggtcaaaagcggagaaacgttggcgctg
ggcggcatttttacccgtaaaaataaatcgggtcaggatagcgtaccgttgcttggcgac
attccctggttcgggcaattatttcgccatgacggaaaagaagatgaacgacgcgagtta
gtggtgtttatcacgccacgactggtttccagtgagtaa

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