Shigella sp. PIB: LXH19_03960
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Entry
LXH19_03960 CDS
T10707
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
shig Shigella sp. PIB
Pathway
shig00541
Biosynthesis of various nucleotide sugars
shig01100
Metabolic pathways
shig01250
Biosynthesis of nucleotide sugars
Module
shig_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LXH19_03960 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shig01005
]
LXH19_03960 (kdsB)
Enzymes [BR:
shig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LXH19_03960 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
shig01005
]
Lipid A
LXH19_03960 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
HH_signal
IspD
Motif
Other DBs
NCBI-ProteinID:
USJ82887
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Position
complement(831942..832682)
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AA seq
246 aa
AA seq
DB search
MSKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAV
QAFGGKAIMTRNDHESGTDRLVEVMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDDPA
LPVATLCHAISAEEAAEPSTVKVVVNTHQDALYFSRSPIPYPRNAEKARYLKHVGIYAYR
RDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRALMAQ
ELAENA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcagttattgtcattccggctcgctatggctcctcgcgcctgccgggtaag
ccactgctcgatattgttggtaaaccgatgatccagcatgtttacgagcgtgcgttacag
gtggcgggcgtcgcggaagtttgggtggcaacagacgatcagcgtgttgaaaaggccgtg
caggcatttggcgggaaagccatcatgacgcgcaacgatcatgaatccggcaccgatcgg
ctggtcgaggtgatgcataaagtcgaggcagatatctacattaacctgcagggcgacgaa
ccaatgattcgcccgcgggatgtagaaacgctgttacaaggaatgcgtgatgaccccgcg
ttgccagtggcaacgctatgccacgcgatttctgccgaagaagcggctgagccaagcacg
gtaaaagtggtggtaaatacccaccaggatgcgctttatttcagccgttcgccgattccg
tatccgcgtaatgctgaaaaagcgcgctacctgaaacacgttggtatttacgcttatcgt
cgcgatgtgctgcaaaactacagccagttaccggagtccatgccagagcaggcagaatca
ctggagcagctgcggttgatgagcgcggggatcaacatccgcacatttgaggttgccgca
accggtccgggcgtcgacaccccagcatgcctggaaaaagtgcgcgccctgatggcacag
gaactggctgaaaacgcatga
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