Shigella sp. PIB: LXH19_04735
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Entry
LXH19_04735 CDS
T10707
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shig Shigella sp. PIB
Pathway
shig00300
Lysine biosynthesis
shig00470
D-Amino acid metabolism
shig01100
Metabolic pathways
shig01110
Biosynthesis of secondary metabolites
shig01120
Microbial metabolism in diverse environments
shig01230
Biosynthesis of amino acids
Module
shig_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LXH19_04735 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LXH19_04735 (lysA)
Enzymes [BR:
shig01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LXH19_04735 (lysA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
USJ83024
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Position
988494..989756
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AA seq
420 aa
AA seq
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MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN
AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR
HHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQGEEAVD
TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDA
GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA
LPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacattcactgttcagcactgataccgatctcaccgccgaaaatctgctgcgtttg
cccgcagaatttggctgcccggtgtgggtctacgatgcgcaaattattcgtcggcagatt
gcagcgctgaaacagtttgatgtggtgcgcttcgcacagaaagcctgttccaatattcat
attttgcgcttaatgcgtgagcagggcgtgaaagtggattccgtctcgttaggcgaaata
gagcgtgcgttggcggcgggttacaatccgcaaacgcaccccgatgatattgtttttacg
gcagatgttatcgatcaggcgacgcttgaacgcgtcagtgaattgcaaattccggtgaat
gcgggttctgttgatatgctcgaccaactgggtcaggtttcgccagggcatcgggtatgg
ctgcgtgttaatccggggtttggtcacgggcatagccaaaaaaccaatactggtggcgaa
aacagcaagcacggtatctggtacaccgatctgcccgccgcactggacgtgatacaacgt
catcatctacagctggtcggcattcacatgcacattggttctggcgtcgattatgcccat
ctggaacaggtatgtggtgctatggtgcgtcaggtcctcgaattcggtcaggatttacag
gctatttctgcgggcggtggcctttctattccttatcaacagggtgaagaggcggttgat
accgaacattattatggtctgtggaatgccgcgcgtgagcaaatcgcccgccatttgggc
caccctgtgaaactggaaattgaaccgggtcgcttcctggtagcgcaggctggcgtatta
attactcaagtgcggagcgtcaaacaaatgggtagccgccactttgtgctggttgatgcc
gggttcaacgatctgatgcgcccggcaatgtacggtagttaccaccatatcagtgccctg
gcagctgatggtcgttctctggaacacgcaccaacggtggaaaccgtcgtcgccgggcca
ttatgtgaatcgggcgatgtctttacccagcaggaagggggaaatgttgaaacccgcgcc
ttgccggaagtgaaggcaggggattatctggtactgcatgatacgggggcatatggcgcg
tcaatgtcatccaactacaatagccgtccgctgttaccagaagttctgtttgataatggt
caggctcggttgattcgccgtcgccagaccattgaagaattactggcgctggaattgctt
taa
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