Shigella sp. PIB: LXH19_05655
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Entry
LXH19_05655 CDS
T10707
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
shig Shigella sp. PIB
Pathway
shig00250
Alanine, aspartate and glutamate metabolism
shig00310
Lysine degradation
shig00350
Tyrosine metabolism
shig00650
Butanoate metabolism
shig00760
Nicotinate and nicotinamide metabolism
shig01100
Metabolic pathways
shig01120
Microbial metabolism in diverse environments
Module
shig_M00027
GABA (gamma-Aminobutyrate) shunt
shig_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LXH19_05655 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LXH19_05655 (gabD)
00310 Lysine degradation
LXH19_05655 (gabD)
00350 Tyrosine metabolism
LXH19_05655 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LXH19_05655 (gabD)
Enzymes [BR:
shig01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LXH19_05655 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LXH19_05655 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LXH19_05655 (gabD)
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Paralog
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
USJ83193
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All DBs
Position
complement(1176630..1178078)
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELATRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLENGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaacctattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtgccgaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccaaccgcgct
ctgcccgcctggcgtgcgctcaccgccaaagaacgcgccaccattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgcctgatgaccctagaacagggcaaa
ccgctggctgaagcgaaaggcgaaattagctacgccgcctcctttattgagtggtttgcc
gaagaaggcaaacgcatttatggcgacaccattcctggtcatcaggccgataaacgcctg
attgttatcaagcagccgattggcgtcaccgcggctatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcacgatggtgctgaaa
cctgccagtcagacgccgttctctgcgctggcgctggcggaactggcgactcgtgcgggc
gttccggctggcgtgtttaacgtggttaccggttcggcgggcgcggtcggtaacgaactg
accagcaatccgctggtgcgcaagctgtcgtttaccggctcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaagaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgacgatgccgacctcgacaaagccgtggaaggcgcactggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatatgtgcaggacggc
gtgtatgaccgctttgccgaaaaattacagcaggcggtgagcaaactgcacatcggcgac
gggctggagaatggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggtgcgcgcgtggtttgcggtggtaaagca
cacgaacgcggcggcaacttcttccagccgaccattctggtggacgttccggccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccactgtttcgttttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgagtttggtcttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaggcgctggaatacggcatcgtcggcatc
aataccgggattatttccaatgaagtggccccgttcggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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