Shigella sp. PIB: LXH19_05900
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Entry
LXH19_05900 CDS
T10707
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shig Shigella sp. PIB
Pathway
shig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LXH19_05900 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shig03400
]
LXH19_05900 (ung)
Enzymes [BR:
shig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LXH19_05900 (ung)
DNA repair and recombination proteins [BR:
shig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LXH19_05900 (ung)
Prokaryotic type
LXH19_05900 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
USJ83230
LinkDB
All DBs
Position
complement(1229861..1230550)
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AA seq
229 aa
AA seq
DB search
MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVI
LGQDPYHGPGQAHGLAFSVRPGIATPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVL
LLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRH
HVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGEKPIDWMPVLPAESE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgaattaacctggcatgacgtgctggctgaagagaagcaacaaccctatttt
cttaataccctacagaccgtcgccagcgagcggcagtccggcgtcactatctatccgcca
caaaaggatgtttttaacgcgttccgctttacagagttgggtgacgttaaagtggtgatt
ctcggccaggatccttatcacggaccgggacaggcgcatggtctggcattttccgttcgc
cccggcattgcgacaccgccgtcactgctgaatatgtataaagagctggaaaatactatt
cccggtttcacccgccctaatcatggttatcttgaaagctgggcgcgtcagggcgttctg
ctactcaatactgtgttgacggttcgcgcaggtcaggcgcattcccacgccagcctcggc
tgggagaccttcaccgataaagtcatcagcctgattaaccagcatcgcgaaggcgtggtg
tttttgttgtggggctcacatgcgcaaaagaaaggggcgattattgataagcaacgccat
cacgtactgaaagcgccgcatccatcaccgctttctgcgcatcgcgggttctttggctgc
aaccattttgtgctggcaaatcagtggctggaacaacgtggcgagaaaccgattgactgg
atgccagtattaccggcagagagtgagtaa
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