Shigella sp. PIB: LXH19_07925
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Entry
LXH19_07925 CDS
T10707
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shig Shigella sp. PIB
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shig03032
]
LXH19_07925 (gyrA)
03400 DNA repair and recombination proteins [BR:
shig03400
]
LXH19_07925 (gyrA)
Enzymes [BR:
shig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LXH19_07925 (gyrA)
DNA replication proteins [BR:
shig03032
]
Prokaryotic type
DNA Topoisomerases
LXH19_07925 (gyrA)
DNA repair and recombination proteins [BR:
shig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LXH19_07925 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
USJ83609
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Position
1643252..1645879
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AA seq
875 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE
VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV
AAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVV
VTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVY
SMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVL
TEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG
VRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERN
GLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVA
EPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaacattgaggaagagctgaagagctcc
tatctggattatgcgatgtcggtcattgttggccgtgcgctgccagatgtccgagatggc
ctgaagccggtacaccgtcgcgtactttacgccatgaacgtactaggcaatgactggaac
aaagcctataaaaaatctgcccgtgtcgttggtgacgtaatcggtaaataccatccccat
ggtgactcggcggtttatgacacgatcgtccgtatggcgcagccattctcgctgcgttac
atgctggtagacggtcagggtaacttcggttccatcgacggcgactctgcggcggcaatg
cgttatacggaaatccgtctggcgaaaattgcccatgaactgatggccgatctcgaaaaa
gagacggtcgatttcgttgataactatgacggcacggaaaaaattcccgacgtcatgcca
accaaaattcctaacctgctggtgaacggttcttccggtatcgccgtaggtatggcaacc
aacatcccgccgcacaacctgacggaagtcatcaacggttgtctggcgtatatcgatgat
gaagacatcagcattgaagggctgatggaacacatcccggggccggacttcccgacggcg
gcaatcattaatggtcgtcgcggtattgaagaagcttaccgtaccggtcgcggcaaggta
tatatccgcgcccgtgctgaagtggaagttgacgccaaaaccggacgtgaaaccattatc
gtccatgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaagattgcggaactg
gtaaaagaaaaacgcgtggaaggcatcagcgcgctgcgtgacgagtctgacaaagacggt
atgcgcattgtgattgaagtgaaacgcgatgcggttggtgaagttgtgcttaacaacctc
tactcccagacccagttgcaggtttctttcggtatcaacatggtggcattgcaccatggt
cagccgaagatcatgaacctgaaagacatcatcgcggcgtttgttcgtcaccgccgtgaa
gtggtgacccgtcgtactattttcgaactgcgtaaagctcgcgatcgtgctcatatcctt
gaagcattagccgtggcgctggcgaacatcgacccgatcatcgaactgatccgtcatgcg
ccgacgcctgcagaagcgaaaactgcgctggttgctaatccgtggcagctgggcaacgtt
gccgccatgctcgaacgtgcgggcgatgatgctgcgcgtccggaatggctggagccagag
ttcggcgtgcgtgatggtctgtactacctgaccgaacagcaagctcaggcgattctggat
ctgcgtttgcagaaactgaccggccttgagcacgaaaaactgctcgacgaatacaaagag
ctgctggatcagatcgcagaactgctgcgtattcttggcagtgccgatcgtctgatggaa
gtgatccgcgaagagctggagctggttcgtgaacagttcggcgacaaacgtcgtactgaa
atcactgccaacagcgccgacatcaacctggaagatctgatcacccaggaagatgtggtc
gtgacgctctctcaccagggctacgttaaatatcagccgctttctgaatacgaagcgcag
cgtcgtggcgggaaaggtaaatctgccgcacgtattaaagaagaagactttattgaccga
ctgctggtggcgaacacccacgaccatattctgtgcttctccagccgtggtcgcgtctat
tcgatgaaagtctatcagttgccggaagccactcgtggcgcgcgtggtcgtccgatcgtc
aacctgctgccgctggagcaggacgaacgtatcactgcgatcctgccggtgaccgagttt
gaagaaggcgtgaaagtcttcatggcgaccgctaacggtactgtgaagaaaaccgtcctc
accgaattcaaccgtctgcgtaccgccggtaaagtggcgatcaaactggttgacggcgat
gagctgatcggcgttgacctgaccagcggcgaagatgaagtaatgctgttctccgccgaa
ggtaaagtggtgcgctttaaagagtcttctgtccgtgcgatgggctgcaacaccaccggt
gttcgcggtattcgtttaggcgaaggcgataaagtcgtctctctgatcgtgcctcgtggc
gatggcgcaatccttaccgcaacgcaaaacggttacggtaaacgtaccgcggtggcggaa
tacccaaccaagtcgcgtgcgacgaaaggggttatctccattaaggttactgaacgtaac
ggtttagtggttggcgcggtacaggtagatgattgcgatcagatcatgatgatcaccgat
gccggtacgctggtacgtactcgcgtttcggaaatcagcatcgtaggccgtaacacccag
ggcgtgatcctcatccgtactgcggaagatgaaaacgtagtgggtctgcaacgtgttgct
gaaccggttgacgaggaagatctggataccatcgatggcagtgccgcggaaggggacgat
gaaatcgctccggaagtggacgttgacgacgagccagaagaagaataa
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