Shigella sp. PIB: LXH19_09145
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Entry
LXH19_09145 CDS
T10707
Symbol
ompC
Name
(GenBank) porin OmpC
KO
K14062
outer membrane protein N
Organism
shig Shigella sp. PIB
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shig02000
]
LXH19_09145 (ompC)
Transporters [BR:
shig02000
]
Other transporters
Pores ion channels [TC:
1
]
LXH19_09145 (ompC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-ProteinID:
USJ83833
LinkDB
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Position
complement(1929588..1930775)
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AA seq
395 aa
AA seq
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MKRKVLAMLVPALLVAGAANAAEVYNKDGNKLDLYGKVAGLHYFSDDAGSDGDMSYARIG
FKGETQIADQFTGYGQWEFNIGANGPESDKGNTATRLAFAGLGFGQNGTFDYGRNYGVVY
DIEAWTDMLPEFGGDTYAGADNFMNGRANGVATYRNNGFFGQVDGLNFALQYQGNNEDDG
LFGQEGSGNGNGRKLAKENGDGFGMSTSYDFDFGLSLGAAYSNSDRTDNQVHKGTHNTRY
GDRFDATAGGETAEAWTVGAKYDANNVYLAAMYAETRNMTGYGDADAIANKTQNFEVVAQ
YQFDFGLRPSIAYLQSKGKDLGGVNSDNFDSQGNHHYTNKDLVKYVDIGMTYYFNKNMST
YVDYKINLLDNDDDFYKENGIATDDIVAVGLVYQF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaagttctggcaatgctggtcccggcgttattagttgctggcgcagcaaat
gcggctgaagtctataataaagatggtaataaactggatttgtacggaaaagtagcgggc
ctgcactacttctctgatgatgctggcagcgatggcgacatgtcatatgcccgtatcggt
ttcaaaggtgaaactcagatcgctgaccaattcactggttatggtcagtgggaatttaac
attggcgcaaacggtcctgaaagcgacaaaggtaataccgcaacgcgtctggcatttgca
ggtttaggctttggtcagaatggtactttcgactatggtcgtaactacggtgtcgtatat
gacatcgaagcatggaccgatatgctgccagaatttggtggcgatacctatgctggtgcc
gacaacttcatgaacggtcgtgctaatggtgttgcaacctaccgtaacaatggcttcttt
ggtcaggtcgatggcctgaactttgctctgcaatatcagggtaataatgaagatgatgga
ttattcggtcaggaaggttctggtaacggtaatggccgtaagttagctaaagagaacggc
gacggcttcggtatgtccacttcctatgactttgactttggtttaagtctgggcgctgct
tactctaactctgaccgtaccgacaatcaggttcacaaaggtactcataacactcgttat
ggagatcgcttcgatgcaactgctggcggtgaaacagcagaagcatggaccgttggtgct
aaatacgacgctaataacgtttacttagcagctatgtatgctgaaacccgtaacatgact
ggttacggtgatgctgatgcgatcgctaacaaaacccaaaactttgaagtggttgctcag
tatcagttcgacttcggtctgcgcccgtccatcgcttacctgcaatctaaaggtaaggat
ttaggcggtgtaaatagtgataacttcgacagccagggcaatcatcattacaccaacaaa
gatctggttaaatatgttgatattggtatgacctactacttcaacaaaaacatgtccacc
tacgttgattacaaaatcaacctgctggacaacgacgacgacttctacaaagaaaacggc
atcgctaccgatgatatcgtagctgtgggcttagtctaccagttctaa
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