Shigella sp. PIB: LXH19_11240
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Entry
LXH19_11240 CDS
T10707
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
shig Shigella sp. PIB
Pathway
shig02010
ABC transporters
shig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LXH19_11240 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LXH19_11240 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shig02000
]
LXH19_11240 (lsrB)
Transporters [BR:
shig02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
LXH19_11240 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF6848
Motif
Other DBs
NCBI-ProteinID:
USJ84222
LinkDB
All DBs
Position
complement(2338375..2339397)
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AA seq
340 aa
AA seq
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MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV
TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK
PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK
EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV
AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG
QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcatcgctttaagaaaatcgccttacttagcgctcttggcattgccgcaatc
tctatgaatgtgcaggccgcagagcgtattgcatttattcccaaactggttggtgtggga
ttttttaccagcggtggcaacggcgcacaacaagcgggtaaagagctgggcgttgatgtg
acctacgacgggccgacagaacccagtgtttctggtcaggtacagttgattaataacttc
gtcaatcagggttataacgccattatcgtttctgcggtttcgcctgatggcttgtgtccg
gcactgaaacgcgccatgcaacgtggtgtgagagtgctgacctgggactctgatactaaa
ccggagtgccgctcttactacattaatcagggaacgcccgcccagttgggaggtatgttg
gtggatatggcggcgcgtcaggtgaataaagacaaagccaaagtcgcgtttttctactca
agccccaccgttacggaccaaaaccagtgggtgaaagaagcgaaagcgaaaatcgccaaa
gagcatccaggctgggaaattgtcactacgcagtttggctataacgatgccactaaatcg
ttacaaaccgcagaaggaatattaaaagcgtatagcgatctcgacgccattatcgccccc
gatgccaacgccctgcccgctgccgcacaagccgcagaaaacctgaaaaatgacaaagtt
gcgattgtcggattcagtacgccaaatgtgatgcgcccgtatgtagagcgcggcacggtg
aaagaatttggcctgtgggatgtggttcagcaaggcaaaatttcagtttatgtcgcggat
gcattattgaaaaaaggatcaatgaaaacgggcgacaagctggatattcagggcgtaggt
caggtggaagtctcgccaaacagcgttcagggctatgactacgaagcggatggtaatggc
atcgtactgttaccggagcgcgtgatattcaacaaagagaatatcggcaaatacgatttc
tga
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