Shigella sp. PIB: LXH19_11960
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Entry
LXH19_11960 CDS
T10707
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
shig Shigella sp. PIB
Pathway
shig00010
Glycolysis / Gluconeogenesis
shig00020
Citrate cycle (TCA cycle)
shig00620
Pyruvate metabolism
shig00650
Butanoate metabolism
shig00720
Other carbon fixation pathways
shig01100
Metabolic pathways
shig01110
Biosynthesis of secondary metabolites
shig01120
Microbial metabolism in diverse environments
shig01200
Carbon metabolism
shig01210
2-Oxocarboxylic acid metabolism
Module
shig_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LXH19_11960 (nifJ)
00020 Citrate cycle (TCA cycle)
LXH19_11960 (nifJ)
00620 Pyruvate metabolism
LXH19_11960 (nifJ)
00650 Butanoate metabolism
LXH19_11960 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
LXH19_11960 (nifJ)
Enzymes [BR:
shig01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
LXH19_11960 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4_9
Fer4
Fer4_21
Fer4_10
Fer4_6
Fer4_8
Fer4_2
Fer4_17
Fer4_18
Transketolase_C
Fer4_4
FlgM
LdpA_Fe-S-bd
Motif
Other DBs
NCBI-ProteinID:
USJ80270
LinkDB
All DBs
Position
2509276..2512800
Genome browser
AA seq
1174 aa
AA seq
DB search
MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSE
AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV
PLADDTILELMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE
QAMNDFAAATGRQYQPFEYYGHSQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRL
YRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVI
GGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEA
LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL
ISQADFVGCHQLQFIDKYQMVERLKPGGIFLLNTPYSVDEVWSRLPQEVQAVLNQKKARF
YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVER
NWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP
PDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE
KINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML
IANATGCSSIYGGNLPSTPYTTDTNGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL
LDQFADKIPAELLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK
ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL
SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQP
EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattactattgacggtaatggcgcggttgcttcggtggcgtttcgcaccagtgaagtt
atcgccatctaccctattacccccagttccacgatggcagaacaggctgatgcatgggca
ggaaacggcttaaagaacgtttggggagacacaccacgcgtggttgaaatgcagtcggaa
gcgggtgctatcgctaccgtgcatggcgctttgcagacgggtgccctttcaacatcgttt
acgtcatcgcagggtttgctgctgatgatcccgacgctgtacaaactggcaggcgaactg
acgccatttgtcctgcatgtagcggcacgtaccgttgccacacatgcactctctattttt
ggcgatcattccgacgttatggcggtgcgccagacgggttgcgcgatgttgtgtgcagca
aacgtccaggaagcgcaagactttgctcttatttcgcacatcgcgacgctgaagagtcgc
gtgccatttattcatttctttgatggtttccgcacgtcccacgagatcaataaaattgtc
ccgctggccgatgacactattcttgaactgatgccgcaggccgaaattgatgctcatcgc
gcccgggcactcaacccggaacatccggtgatccgcggtacgtccgccaatcctgatact
tatttccagtctcgcgaagccaccaacccatggtacaacgcggtctatgaccatgttgag
caggcgatgaatgatttcgctgccgcgacaggtcgtcagtatcagccgtttgagtattac
gggcattcgcaagcggaacgggtgattatcctgatgggctctgccattggtacctgtgaa
gaagtggttgatgaactgctaacccgtggcgaaaaagtcggcgtgctgaaagttcgcctg
taccgtcccttctccgccaaacacttgctacaagctctgccgggatccgtacgcagcgtg
gcggtactggacagaaccaaagaaccaggtgcccaggcagaaccgctctatctggatgtg
atgaccgcactggcagaagcctttaataatggcgagcgcgaaaccctgccccgtgtcatt
ggtgggcgctatggtctttcatccaaagaatttggcccggactgtgtactggcggtattt
gccgagctcaacgcggctaaaccgaaagcgcgctttacggttggtatttacgatgatgtg
accaatctgtcactgccgttgccggaaaacaccctgccaaactcggcgaaacttgaagcc
ttgttttatggccttggcagtgatggcagcgtttccgcgaccaaaaacaatatcaagatt
atcggtaattccacgccgtggtacgcacagggctattttgtttacgactccaaaaaggcg
ggcggcctgacggtttctcaccttcgcgtgagcgagcagccgattcgttccgcttatctc
atttcccaggctgattttgttggctgccaccagttgcagtttatcgataaatatcagatg
gttgaacgtttaaaacctggcggcattttcctgctcaacacgccgtacagcgtagatgaa
gtgtggtcgcgcttgccgcaggaagttcaggccgtgttaaaccagaaaaaagcgcgcttc
tatgtgattaacgcggcgaaaatcgcccgcgaatgtggcctggcggcccgtattaatacc
gtcatgcagatggcttttttccatctgacgcaaattctgcctggcgatagcgccctcgca
gaattgcagggtgcgattgccaaaagttacagtagcaaaggtcaggatctggtggagcgc
aactggcaggctctggcgctggcgcgtgaatccgtagaagaagttccgttgcagccggtt
aatccgcacagcgccaatcgaccgcctgtggtttccgatgccgctcctgatttcgtgaaa
accgttaccgcggcgatgctcgccgggcttggtgatgccctccccgtttcggcgctgccg
ccagacggcacctggccgatgggcaccacgcgctgggaaaaacgcaatatcgccgaagag
atccccatctggaaagaggaactctgtacccaatgtaaccactgcgtcgccgcttgccca
cactcagctattcgcgcaaaagtggtgccgcctgaagcgatggaaaacgcccctgccagc
ctgcattcgctggatgtgaaatcgcgtgatatgcgcgggcagaaatatgtcttgcaggtg
gctccggaagattgcaccggttgtaacctgtgcgtcgaagtttgcccggcgaaagaccgt
cagaatccagagattaaagccatcaatatgatgtcgcggctggaacatgtcgaagaagag
aaaatcaattacgatttcttcctcaacctgccagaaatcgaccgtagcaaactggaacgt
attgatattcgtacatcgcagctgattacaccgctgtttgaatattccggtgcttgctcc
ggttgtggcgagacgccgtatattaaattgctgactcagctctatggcgaccggatgttg
atcgctaacgccaccggctgttcttcaatttatggcggtaacctgccctctacaccgtat
accaccgataccaacggtcgcgggccggcatgggcgaactctctatttgaagataatgcc
gaatttggccttggtttccgcctgacggtcgatcaacaccgtgtccgcgtgctgcgtctg
ctggatcaatttgccgataaaatcccggcggaattactgactgcgttgaaatcagacgcc
acgccagaggttcgtcgagaacaggtcgcagctttacgccagcaactcaacgatgttgcc
gaagcacatgaactgctacgtgacgcagatgcactggtagaaaaatcaatctggctgatt
ggtggcgacggctgggcttacgatatcggctttggcggtctggatcatgtattgagtttg
accgaaaacgtcaacattctggtgctggatacgcaatgctattccaataccggtggtcag
gcgtcgaaagcgacaccgctgggtgcagtaactaagttcggcgagcacggcaaacgtaaa
gcgcgtaaagatcttggcgtcagtatgatgatgtacggtcatgtttatgtggcgcagatt
tctctcggcgcgcagctcaaccagaccgtgaaagcgattcaggaagcggaagcgtatccg
gggccatcgctgatcatcgcttatagcccctgtgaagagcatggttacgatctggcactc
agtcacgaccagatgcgccaactcactgctaccggcttctggccgctatatcgctttgat
ccgcgtcgtgccgatgaaggcaaactgccgctggcgctggattcacgcccgccgtcagaa
gcactggaagaaacgttacttcacgagcagcgtttccgtcgtctgaattcgcagcagcca
gaagtggcagaacagttatggaaagatgccgcagctgatttgcaaaaacgctatgacttc
ctggcacaaatggccggaaaagcggaaaaaagcaacaccgattaa
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