Shigella sp. PIB: LXH19_12500
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Entry
LXH19_12500 CDS
T10707
Symbol
oppD
Name
(GenBank) murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
shig Shigella sp. PIB
Pathway
shig01501
beta-Lactam resistance
shig02010
ABC transporters
shig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LXH19_12500 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LXH19_12500 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LXH19_12500 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shig02000
]
LXH19_12500 (oppD)
Transporters [BR:
shig02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
LXH19_12500 (oppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
ABC_ATPase
Formyl_trans_C_2
DUF87
Motif
Other DBs
NCBI-ProteinID:
USJ80370
LinkDB
All DBs
Position
complement(2618811..2619824)
Genome browser
AA seq
337 aa
AA seq
DB search
MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGS
GKSQTAFALMGLLAANGRIGGSATFNGREILNLPERELNKLRAEQISMIFQDPMTSLNPY
MRVGEQLMEVLMLHKNMSKAEAFAESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIA
MALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVL
VMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCP
FQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaattgaaactgcaactgtgccgctcgcacaacaacaggctgacgcactgctg
aacgtgaaagatttgcgtgtcacctttagtaccccggacggcgacgtcacggcggtcaat
gatttgaatttttccctacgtgccggagaaacgctgggcattgtaggtgagtctggttcg
ggtaaatcgcaaactgcatttgcgttgatgggcctgttggctgccaacggacgtattggc
ggatcggcaaccttcaatgggcgtgaaatcctcaatttgccagagcgtgaactcaataaa
ctgcgcgctgaacaaatctcaatgatttttcaggacccaatgacttcgttgaatccctat
atgcgtgtcggtgagcagttgatggaagtgctgatgctgcataagaacatgagcaaagct
gaggcgtttgcagagtcggtgcggatgctcgatgcggtaaaaatgccggaagcacgtaaa
cgcatgaaaatgtacccgcatgaattttctggtggcatgcgtcagcgagtcatgattgcg
atggcattgctatgtcgacctaagctgctgattgctgatgaacccactactgcgctggac
gtcaccgtacaggcgcagatcatgacgctattaaatgaactgaagcgggaatttaatacc
gccatcattatgatcacccacgatcttggcgtggtggcggggatctgcgacaaagtgctg
gtaatgtacgccgggcgcacgatggaatatggcaatgcgcgcgatgtcttttatcaaccc
gttcatccttattctatcggtttgctcaacgcggtgccgcgtcttgatgcggaaggtgaa
acaatgttgaccatcccgggtaatccgccaaacttgctgcgattaccgaaaggttgcccg
ttccagccacgttgtccacatgcgatggaaatttgtagtagcgcaccgccgctggaagag
tttacgcctggccgtctgcgtgcttgctttaaaccggtggaggaactgttatga
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