Shigella sp. PIB: LXH19_15970
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Entry
LXH19_15970 CDS
T10707
Symbol
ybdG
Name
(GenBank) mechanosensitive ion channel YbdG
KO
K16053
miniconductance mechanosensitive channel
Organism
shig Shigella sp. PIB
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shig02000
]
LXH19_15970 (ybdG)
Transporters [BR:
shig02000
]
Other transporters
Pores ion channels [TC:
1
]
LXH19_15970 (ybdG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
BatA
MRP-63
Motif
Other DBs
NCBI-ProteinID:
USJ81005
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All DBs
Position
3328915..3330162
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AA seq
415 aa
AA seq
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MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVVLRTFEKRAIASSRLWL
QIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLD
VILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLM
LVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIP
TWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEGEMERLNKAHLLKPYLTSRHQ
EINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLP
LEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAGAFKQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttaatatcccaggttgaagatttagcgggtattgagatcgatcacaccacc
tcaatggtgatgattttcggtattatttttctgaccgccgtcgtggtgcatattattttg
cattgggtggtactgcggaccttcgaaaaacgcgccattgccagttcacggctttggttg
caaatcattacccagaataaactcttccaccgtttagcttttaccctgcaggggattatc
gtcaatattcaggcggtattctggctgcaaaaaggcaccgaagcggcagatattctgact
acctgcgcgcagttgtggatcatgatgtatgcgctgctttcagtcttctcgttgctggat
gttattttgaatctggcgcagaaattcccggcggcatctcagttaccgctgaaagggata
tttcaggggattaaactgatcggcgcgattctggtcggcattttgatgatctcgctgctg
attggtcagtcgccagcgattctgatcagcggtcttggtgcaatggctgccgtgctgatg
ttggtatttaaagatccgattcttggtctggtggcaggtattcagctttccgcgaacgat
atgctgaaactgggcgactggctggagatgccgaaatacggcgcggatggcgcggtgatc
gatattgggttaaccaccgtcaaagtgcgtaactgggacaataccattaccactattccc
acctggtctctggtctctgactcctttaaaaactggagcgggatgtcagcatctggcggg
cgacgtattaagcgcagtatcagtattgatgtcaccagtattcgttttcttgatgaaggc
gaaatggaacgtctgaataaagcgcatttgttaaagccatatttaaccagccgccatcag
gaaattaatgagtggaatcgccagcaaggttctacggagtcggtattaaacctgcgccga
atgaccaatattggaacctttcgtgcctatctgaacgaatatctgcggaatcatccgcgg
attcgcaaagatatgaccttaatggtacgccaactggctcctggtgataacggtttaccg
ctcgagatctatgcgtttaccaacaccgtggtgtggctggaatatgaaagcattcaggct
gatatattcgaccacatatttgcgattgtcgaagagtttggtctgcgacttcatcagtcg
ccaactggcaatgatattcgctctctggcgggtgcatttaagcagtaa
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