Shigella sp. PIB: LXH19_16975
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Entry
LXH19_16975 CDS
T10707
Name
(GenBank) DNA-binding transcriptional regulator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
shig Shigella sp. PIB
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shig03000
]
LXH19_16975
Transcription factors [BR:
shig03000
]
Prokaryotic type
Helix-turn-helix
IclR family
LXH19_16975
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Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
HTH_24
MarR
GAF
HTH_Crp_2
HTH_36
GAF_2
HTH_11
HTH_29
HTH_28
GAF_3
TrmB
GntR
BRISC_FAM175B_helical
HTH_DeoR
HTH_23
Rrf2
HTH_5
dCache_1
Motif
Other DBs
NCBI-ProteinID:
USJ81196
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Position
3571997..3572830
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AA seq
277 aa
AA seq
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MQNNEQTEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGY
VRRSPSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVSTLDVDAMVV
RETTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQERKELIEMLASRPGDDYQLAR
EPLKLEAILARARKEGYGQNYRGWEQEEKIASIAVPLRSEQRVIGCLNLVYMASAMTIEQ
AAEKHLPALQRVAKQIEEGVESQAILVAGRRSGVHLR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaatgagcagacggaatacaaaaccgtgcgcggcttaacccgcggtctaatg
ttattaaatatgttaaataaacttgatggcggtgccagcgtcgggctgctggcggaactc
agcggcctgcatcgcaccactgtgcggcgactgctggagacgctgcaggaagagggatat
gtccggcgtagtccctccgatgatagtttccgtttgaccatcaaagtgcggcaattaagc
gaaggatttcgtgacgaacagtggatttctgcactggcggccccactgctgggcgatctg
ttgcgcgaagtggtatggccgacagatgtgtccaccctggatgttgatgcaatggtggta
cgcgaaaccacccatcgtttcagccgcttatcttttcaccgggcaatggtcgggcgacgt
ttaccgcttctgaaaaccgcctcgggcctgacctggctggccttttgcccggaacaagaa
cgcaaggaattaatcgagatgttagcctcccgccccggtgatgactatcaactggcacgg
gaaccgttaaagctggaagccattctggcgcgggcgcgcaaagaggggtacggacagaac
taccgcggctgggagcaagaagaaaagatcgcctctattgccgtaccgctgcgcagtgaa
caacgggtgattggctgtctgaatctggtgtatatggcgagcgcaatgaccattgaacag
gcagcggaaaagcatcttccggcgctacaacgggtggcaaaacagatcgaagaaggggtt
gaatcgcaggctattctggtggccggacggcgaagcggcgtgcatttacgttga
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