Shigella sp. PIB: LXH19_17220
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Entry
LXH19_17220 CDS
T10707
Symbol
fdeC
Name
(GenBank) intimin-like adhesin FdeC
KO
K13735
adhesin/invasin
Organism
shig Shigella sp. PIB
Pathway
shig05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
LXH19_17220 (fdeC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IAT_beta
Invasin_D3
Big_1
CarboxypepD_reg
Glyco_hydro2_C5
Filamin
Big_3_5
DUF7382
CcmH
DUF5013
Motif
Other DBs
NCBI-ProteinID:
USJ81239
LinkDB
All DBs
Position
complement(3628922..3633172)
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AA seq
1416 aa
AA seq
DB search
MSRYKTGHKQPRFRYSVLARCVAWANISVQVLFPLAVTFTPVMAARAQHAVQPRLSMGNT
TVTGDNNVEKNVASFAANAGTFLSSQPDSDATRNFITGIATAKANQEIQEWLGKYGTARV
KLNVDKDFSLKDSSLEMLYPIYDTPTNMLFTQGAIHRTDDRTQSNIGFGWRHFSGNDWMA
GVNTFIDHDLSRSHTRIGVGAEYWRDYLKLSANGYIRASGWKKSPDVEDYQERPANGWDI
RAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQKDPHAITAEVNYTPVPLLTLSAGHK
QGKSGENDTRFGLEVNYRIGEPLEKQLDTDSIRERRMLAGSRYDLVERNNNIVLEYRKSE
VIRIALPERIEGKGGQTLSLGLVVSKATHGLKNVQWEAPSLLAEGGKITGQGSQWQVTLP
AYRPGKDNYYAISAVAYDNKGNASKRVQTEVVITGAGMSADRTALTLDGQSRIQMLANGN
EQKPLVLSLRDAEGQPVTGMKEQIKTELTFKPAGNIVTRSLKATKSQAKPTLGEFTETEA
GVYQSVFTTGTQSGEATITVSVDGMSKTVTAELRATMMDVANSTLSANEPSGDVVADGQQ
AYTLTLTAVDSEGNPVTGEASRLRLVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVL
RAFSEQYQLGTLQQTLKFVAGPLDAAHSSITLNPDKPVVGGTLTAIWSTKDANDNPVTSL
TPEAPSLAGAAAVGSTASGWTNNGDGTWTAQITLGSTAGELEVMPKLNGQDAAANAAKVT
VVADALSSGQSTVSVAADRVKAGESTTVTLVAKDAHGNAISGLSLSTSLTGTASEGATIS
SWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNK
APTVKTTTELTFTVKDVYGNPVTGLKPDAPVFSGAASTGSERPSAGSWTEQSNGIYVATL
TLGSAAGQLSVMPRVNGQNAVAQPLVLNVAGDASKAEIRDMTVKVNNQLANGQSANQITL
TVVDSYGNPLQGQNVTLTLPKGVTSKTGNTVTTDAAGKADIELISTVAGELEIAAAVKNS
QKTVTVKFNADASTGQANLQVDTAVQKVANGKDAFTLTATVKDQYGNLLPGAVVVFNLPR
GVKPLADGNIMVNADKEGKAELKVVSVTAGTYEITASAGNDQPSNAQSVTFVADKTTATI
SSIEVIGNRAVADGKTKQTYKVTVTDANNNLLKDSDVTLTASPAKLVLDPNGTATTNEQG
QAIFTATTTVAAKYTLTAKVEQADGQESTKTAESKFVADDKNAELAASPERVDSLVADGK
TTATLTVTLMSGVNPVGGTMWVDIEAPEGVTEADYQFLPSKNDHFASGKITRTFSTNKPG
TYTFTFNSLTYGGYEMKPVTVTINAVPADTEGAEEK
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgttataaaacaggtcataaacaaccacgatttcgttattcagttctggcccgc
tgcgtggcgtgggcaaatatctctgttcaggttctttttccactcgctgtcacctttacc
ccagtaatggcggcacgtgcgcagcatgcggttcagccacggttgagcatgggaaatact
acggtaactggtgataataacgtggagaaaaatgtcgcgtcgtttgccgcaaatgccggg
acatttttaagcagtcagccagatagcgatgcgacacgtaattttattaccggaatagcc
accgctaaagctaaccaggaaatacaggagtggctcggaaaatatggtacagcgcgcgtc
aaactgaatgtcgataaagatttctcgctgaaggattcttcgctggaaatgctttatcct
atttatgatacgccgacaaatatgttgttcactcagggggcaatacatcgtaccgacgat
cgtactcagtcaaatattggttttggctggcgtcatttttcaggaaatgactggatggcg
ggggtgaatacttttatcgatcatgatttatcccgtagtcatacccgcattggtgttggt
gcggaatactggcgtgattatttgaaactgagcgccaatggttatatccgggcttctggc
tggaaaaaatcaccggatgttgaggattatcaggaacgcccggcgaatggctgggatatt
cgtgctgagggctatttacctgcctggccgcagcttggcgcaagcctgatgtatgaacag
tattatggcgatgaagtcgggctgtttggtaaagataaacgccagaaagatccacatgcg
attaccgctgaagtgaattacacgccagtgcctcttctgaccctgagtgccgggcataag
cagggcaagagtggtgagaatgacactcgctttggcctggaagttaattatcggattggc
gaacctctggaaaaacaactcgatacagacagcattcgcgagcgtcgaatgctggcaggc
agccgctatgacctggttgagcgtaataacaacatcgttcttgagtaccgcaaatctgaa
gtgattcgtattgctctgcctgagcgtattgaaggcaagggcggtcagacactttccctg
gggcttgtggtcagcaaagcaactcacggactgaaaaatgtgcaatgggaagcgccgtca
ttactggctgaaggtggcaaaattaccggtcagggtagtcagtggcaagtaacgctcccg
gcttaccgtccaggcaaagacaattattatgcgatttcagcagttgcctacgataacaaa
ggtaatgcctcgaaacgtgtgcagacagaagtggttattaccggagctggtatgagcgcc
gatcgcacggcgttaacgcttgacggtcagagccgtattcaaatgcttgctaacggtaat
gagcaaaagccgctggtgctgtctctgcgcgacgccgagggccagccagtcacgggcatg
aaggagcagatcaagactgaactaaccttcaaaccggctggaaatattgtgactcgttcc
ctgaaggccactaaatcacaggcaaagccaacactgggtgagttcaccgaaactgaagca
ggggtgtatcagtctgtctttacgaccggaacgcagtcaggtgaggcaacgattactgtt
agcgttgatggcatgagcaaaaccgtcactgcagaactgcgggccacgatgatggatgtg
gcaaactccaccctgagcgctaacgagccgtcaggtgacgtggttgctgatggtcagcaa
gcctacacgctgacgctgactgcggtggactccgagggtaatccggtgacgggagaagcc
agccgcctgcgacttgttccgcaagacactaatggtgttaccgttggtgccatttcggaa
ataaaaccaggggtttacagcgccacggtttcttcgacccgtgccggaaacgttgttttg
cgcgccttcagcgagcagtatcagctgggcacattacaacaaacgctgaagtttgttgcc
gggccgcttgatgcagcacattcgtccatcaccctgaatcctgataaaccggtggtcggc
ggtacgcttacggcaatctggtcgacaaaagatgccaatgacaaccctgtgaccagcctc
acgccggaagcgccgtcattagcgggtgccgctgctgttggttctacggcatctggctgg
acaaataatggtgatgggacgtggactgcgcagattactctcggctctacggcgggtgaa
ttagaagttatgccgaagctaaatggacaggatgcggcagcaaacgcggcaaaagtaacc
gtggtggctgatgcgttatcttcaggccagtcgacagtgtctgtagccgcagatcgcgta
aaagcaggtgaaagcacaaccgtgacgctggtggcgaaagatgcgcatggcaacgctatc
agtggtctttcattgtcgacaagtttaacggggaccgcctctgaaggggcgactatttcc
agttggaccgaaaaaggtgacggttcctatgttgctacgttgaccacaggcggaaagacg
ggcgagcttcgtgtcatgcctctcttcaacggccagccagcagccaccgaagccgcgcag
ttgacggtcatcgccggagagatgtcatcagcgaactctacgcttgttgcggacaataag
gctccgaccgtcaaaacgacgacggaactcaccttcaccgtgaaggatgtgtacgggaac
ccggtcaccgggctgaagccagatgcaccagtgtttagcggtgccgccagcacggggagt
gagcgtccttcagcaggaagctggacagagcaaagtaacggcatctatgttgcgacctta
acgctgggatcggctgcgggtcagttgtctgtgatgccgcgagtgaacggccaaaatgct
gttgctcagccactggtgctgaatgttgcaggtgacgcatctaaggctgagattcgtgat
atgacagtgaaggttaataaccaactggctaatggacagtctgctaaccagataaccctg
accgttgtggacagctatggtaacccgttgcaggggcaaaatgtgacgctgaccctgccg
aaaggtgtgaccagcaagacggggaatacggtaacaaccgatgcggcaggtaaagcggat
attgagttgatatcaaccgttgcaggggaacttgaaatcgcggccgcggtgaaaaactct
cagaagacggtcacggtgaaatttaacgcggatgccagcaccggtcaggcaaacctgcag
gtagacaccgccgttcaaaaagtggcaaacggcaaagatgcctttacgctgacggcaacg
gttaaggatcaatacggcaaccttcttcctggcgctgtggtcgtctttaatctgcctcgg
ggcgtcaaaccgcttgcagacggtaatatcatggtgaacgccgacaaggagggtaaagcg
gaactgaaagtggtttccgtgactgccggaacctatgagatcacggcatcagcaggaaat
gaccagccttcgaatgcgcagtctgtaacgtttgtggccgataagactacggcgaccatc
tccagtattgaggtgattggcaaccgtgcagtggcggacggcaaaaccaaacagacgtat
aaagttacggtgactgacgccaataacaacctgttgaaagatagcgacgtgacgctgact
gccagcccggcgaagttagttctggatcccaatgggacggcgacaacgaatgagcaagga
caggctattttcaccgccacgaccactgtcgcagcgaaatatacactcacggcgaaagtg
gaacaggccgacggtcaggaatcgacgaaaactgccgaatctaaattcgtcgcggatgat
aaaaacgcggagctcgctgcatctccagagcgtgtagattctctggtggcggacgggaag
actactgcaacactgacggttactctgatgtcgggtgtcaaccccgtaggaggaaccatg
tgggtcgacattgaggctccggaaggggtgacagaggcggattatcagttcctgccgtcg
aaaaatgaccatttcgcgagcgggaaaatcacgcgtacatttagtaccaacaagccaggt
acatacacattcacattcaactctttgacatatggagggtatgaaatgaaaccagtgact
gtgacaattaacgccgttcctgcagatactgaaggcgctgaggagaaataa
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