Shigella sp. PIB: LXH19_18630
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Entry
LXH19_18630 CDS
T10707
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
shig Shigella sp. PIB
Pathway
shig00220
Arginine biosynthesis
shig00240
Pyrimidine metabolism
shig00250
Alanine, aspartate and glutamate metabolism
shig01100
Metabolic pathways
shig01110
Biosynthesis of secondary metabolites
shig01240
Biosynthesis of cofactors
Module
shig_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LXH19_18630 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LXH19_18630 (carB)
00220 Arginine biosynthesis
LXH19_18630 (carB)
Enzymes [BR:
shig01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LXH19_18630 (carB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
USJ81478
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All DBs
Position
complement(3933047..3936265)
Genome browser
AA seq
1072 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGG
IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVG
ITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDT
AYMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIGYPLVVRPSYVLG
GRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIE
VNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLA
AKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRR
AIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagtatcctgattctgggtgcgggcccgattgttatc
ggtcaggcgtgtgagtttgactactctggcgcgcaagcatgtaaagccctgcgcgaagag
ggttaccgcgtcattctggtgaactccaacccggcgaccatcatgaccgacccggaaatg
gctgatgcgacctacatcgagccgattcactgggaagtggtacgcaagattattgaaaaa
gagcgcccggacgcggtgctgccaactatgggcggtcagacggcgctgaactgtgcgctg
gagctggaacgtcagggcgtgctggaagagttcggcgtcaccatgattggtgccactgcc
gatgcgattgataaagcagaagaccgccgccgtttcgacgtggcgatgaagaaaatcggc
ctcgaaaccgcgcgttccggtatcgcgcacaccatggaagaagcgctggcggttgccgct
gacgtgggcttcccatgcattattcgtccatcctttaccatgggcggtagcggcggcggt
atcgcttataaccgcgaagagtttgaagaaatttgcgcccgcggtctggatctctctccg
actaaagagctgctgattgatgagtcgctgatcggctggaaagagtacgagatggaagtg
gtgcgtgataaaaacgacaactgcatcatcgtctgctctatcgaaaacttcgatgcgatg
ggcatccacaccggtgactccatcactgtcgcgccagcccaaacgctgaccgacaaagaa
tatcaaatcatgcgtaacgcctcgatggcggtgctgcgtgaaatcggcgttgaaaccggt
ggttccaacgtccagtttgcggtgaacccgaaaaacggtcgcctgattgttatcgaaatg
aacccgcgcgtgtcgcgttcttcggcgctggcgtcgaaagccactggtttcccgattgcc
aaagtggcggcgaaactggcggtgggttacaccctcgacgaactgatgaacgacatcacc
ggtgggcgtactccggcctccttcgagccgtccatcgactacgtggtcaccaaaattcct
cgcttcaacttcgagaaattcgccggggcgaacgaccgtctgaccactcagatgaaatcg
gttggcgaagtgatggcgattggtcgcacgcagcaggaatccctgcaaaaagcgctgcgc
ggcctggaagtgggcgcgaccggcttcgatccgaaagtgagtctcgacgacccggaagcg
ctgactaaaatccgccgcgagctgaaagacgctggcgcagagcgtatctggtatatcgcc
gatgctttccgcgcgggcctgtccgtagacggcgtcttcaacctgaccaacattgaccgc
tggttcctggtacagattgaagagctggtgcgtctggaagagaaagtggcggaagtgggc
atcactggcctgaacgctgacttcctgcgccagttgaaacgcaaaggctttgccgacgcg
cgtctggcaaaactcgcgggcgtgcgtgaagcagaaatccgtaagctgcgtgaccagtat
gacctgcacccggtttacaagcgcgtggatacctgtgcggcagagttcgctaccgacacc
gcttatatgtactccacttatgaagaagagtgcgaatccaacccatctgaccgtgaaaaa
atcatggtcctcggcggcggcccgaaccgtatcggtcagggtatcgaattcgactactgt
tgcgtacacgcctcactggcgctgcgcgaagacggttacgaaaccattatggttaactgt
aacccggaaaccgtctccactgattacgacacttccgaccgcctctacttcgagccggta
actctggaagacgtgctggaaattgtgcgtattgagaagccgaaaggcgttatcgtccag
tacggcggtcagaccccgctgaaactggcgcgcgcgctggaagctgctggcgtaccggtt
atcggtaccagcccggatgccatcgaccgtgcggaagaccgtgaacgcttccagcatgcg
gttgagcgtctgaaactgaaacaaccggcgaacgccaccgttaccaccatcgaaatggcg
gttgagaaagcgaaagagattggctacccgctggtggtacgtccgtcttacgttctcggc
ggtcgggcgatggaaatcgtctatgacgaagctgacctgcgtcgctacttccagacggcg
gttagcgtgtctaacgatgcgccagtgttgctggatcatttccttgatgacgcagtagaa
gttgacgtggatgctatctgcgacggcgaaatggtgctgattggcggcatcatggaacac
attgagcaggcgggcgtgcactccggtgactccgcatgttctctgccagcctacacttta
agtcaggaaattcaggatgtgatgcgccagcaggtgcagaaactggccttcgaattgcag
gtgcgcggcctgatgaacgtgcagtttgcggttaaaaacaacgaagtctacctgattgaa
gttaacccgcgtgcggcgcgtaccgttccgttcgtctccaaagccaccggcgtaccgctg
gcaaaagtggcggcgcgtgtgatggctggcaaatcgctggctgagcagggcgtaaccaaa
gaagttatcccgccgtactactcggtgaaagaagtggtgctgccgttcaacaaattcccg
ggcgttgacccgctgttagggccagaaatgcgctctaccggggaagtcatgggcgtgggc
cgcaccttcgctgaagcgtttgccaaagcgcagctgggcagcaactccaccatgaagaaa
cacggtcgtgcgttgctttccgtgcgcgaaggcgacaaagaacgcgtggtggacctggcg
gcaaaactgctgaaacagggcttcgagctggatgcgacccacggcacggcgattgtgctg
ggcgaagcgggtatcaatccgcgtctggtaaacaaggtgcatgaaggacgtccgcacatt
caggaccgcatcaagaatggcgaatatacctacatcatcaacaccacctcaggccgtcgt
gcgattgaagactcccgcgtgatccgtcgcagtgcgctgcaatataaagtgcattatgac
accaccctgaacggtggtttcgctaccgcgatggcgctgaatgccgatgcgactgaaaaa
gtaatttcggtgcaggaaatgcacgcgcagatcaaataa
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