Shigella sp. PIB: LXH19_18640
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Entry
LXH19_18640 CDS
T10707
Symbol
dapB
Name
(GenBank) 4-hydroxy-tetrahydrodipicolinate reductase
KO
K00215
4-hydroxy-tetrahydrodipicolinate reductase [EC:
1.17.1.8
]
Organism
shig Shigella sp. PIB
Pathway
shig00261
Monobactam biosynthesis
shig00300
Lysine biosynthesis
shig01100
Metabolic pathways
shig01110
Biosynthesis of secondary metabolites
shig01120
Microbial metabolism in diverse environments
shig01230
Biosynthesis of amino acids
Module
shig_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LXH19_18640 (dapB)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
LXH19_18640 (dapB)
Enzymes [BR:
shig01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.8 4-hydroxy-tetrahydrodipicolinate reductase
LXH19_18640 (dapB)
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Motif
Pfam:
DapB_C
DapB_N
B_lactamase-like_C
Motif
Other DBs
NCBI-ProteinID:
USJ81480
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All DBs
Position
complement(3937887..3938708)
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AA seq
273 aa
AA seq
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MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGV
TVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAAD
IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAH
ALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSR
MTFANGAVRSALWLSGKESGLFDMRDVLDLNNL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgcaaacatccgcgttgccatcgcgggagccgggggccgtatgggccgccag
ttgattcaggcggcgctggcattagagggcgtgcagcttggcgcggcgctggagcgcgaa
ggatcttctttactgggcagcgacgccggtgagctggctggagcagggaaaacaggcgtt
accgtgcaaagcagcctcgatgcggtaaaagatgattttgatgtgtttatcgattttacc
cgtccggaaggtacgctgaatcatctcgctttttgtcgccagcatggcaaagggatggtg
atcggcactacggggtttgacgaagccggtaaacaggcgattcgtgacgcagccgccgat
attgcgattgtctttgcagccaattttagcgttggcgttaacgtcatgcttaaactgctg
gagaaagcagccaaagtgatgggggactacaccgatatcgaaattattgaagcacatcat
agacataaagttgatgcgccgtcaggcaccgcactggcaatgggagaggcgatcgcccac
gctcttgataaagatctgaaagattgcgcggtctacagtcgtgaaggccataccggtgaa
cgtgtgcctggcaccattggttttgccaccgtgcgtgcaggtgacatcgttggcgaacat
accgcgatgtttgccgatattggcgagcgtctggagatcacccataaggcatccagccgc
atgacatttgctaacggtgcggtaagatcggctttgtggttgagtggtaaggaaagtggt
ctttttgatatgcgagatgtgcttgatctcaataatctgtaa
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