Shigella sp. PIB: LXH19_19230
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Entry
LXH19_19230 CDS
T10707
Name
(GenBank) inverse autotransporter beta domain-containing protein
KO
K13735
adhesin/invasin
Organism
shig Shigella sp. PIB
Pathway
shig05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
LXH19_19230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_1
IAT_beta
Invasin_D3
Big_3_5
Invasin_D4
MG4
GldM_4th
Thermo-DBP
Motif
Other DBs
NCBI-ProteinID:
USJ81590
LinkDB
All DBs
Position
4056468..4061708
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AA seq
1746 aa
AA seq
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MSSTNAHQIKNNDQNSLCGLGDKIRRLTAGVCLFTQIFFPVMATAQNVVHAKPQTTVSSA
PPLLENNTVPYTLGALESAQSVADRFGISLEELRRLNQFRTFARGFDNVRQGEELDVPAT
TLQKSHEQQNAVPPANGENTLENQIASTSQRVGTLLSQDMNSEQASGMARGWASSEASGA
MTDWLNNFGTAKISLGVDEDFSLKNSQFDFLHPWYDTPDYLLFSQHTLHRTDDRTQINTG
LGWRHFTPSWMSGINLFFDHDLSRYHSRAGLGAEYWRDYLKLSSNAYIGLTGWRSAPELD
NDYEARPANGWDLRAEGWLPAWPQLGGKLVYEQYYGDEVALFDKNDRQSNPHAITAGLNY
TPFPLLTLSAEQRQGKQGENDTRFAVDLTWQPSSSMQKQLNPDEVAGRRSLAGSRYDLID
RNNNIVLEYRKKELIRLSLLDPVKGKSGEIKPLVSSIQTKYALKGYNIEAAALEAAGGKV
STSGKDITVTLPGYRFTNTPETDNTWSIDVTAEDVKGNLSRHEQSMVVIQAPTLSQKDSL
LSVNPLTVAADKKSTTTLTVTAHDSDGTPVPGLALQTRSEGVQDITLSDWTDNGDGSYTQ
MLTAGTTSGSVTLTPQINGESAVKESIVVNIVPVVSSRDHSSITIDNVSYYAGDDIKVRV
ELKDDSNQPVAYQKEELVKAVTVENSKPGATIVWHEEQPGVYAANYPAHKQGTALRAQLS
LHNWNAPLQSHIYNIEANQNKARVATLSATNNDVYADKKTFNTLTINVTDESDNPLTNHQ
VTFKNEKGSAEFVEPPQQNTDAYGVATINMVSQVAEENTISATLPNGFSQRIIAKFVSDS
STPKFKQLVADPDTIIAGNSQGSTLTATVTDFHNNPLKDMKVNFVAPGGSQLDNTSATTD
QSGIVRVHLTSSKAGSYSVDASLEADKNIHQSVTITVVPNREQSVMTLNAGSGSAIANNT
NTVILTASVKDVYGHPLPDEDVKFTLPASMTGNFTLSSETVRTDANGDAVVTLRGTKAGE
FTVTATLTRNNTVAHQQVTFIGDTNSAQLQPLTASLNTIVAGNSTGSTLTATILDAYQNP
LKDQLVTFQSNDVTLSGTEVTTDTLGQATVTMTSNIAGQHNVVVSRKAQPSDNKTFSLLV
LPDESSAKVISITGAEKTITVGENITLRILVQDAFNNVIAGQRVRLSAQPTANITIGDTA
YTDNNGYAYVNLLSTQPGFYQVTATLDNNSSSKVDVNVANGKLELTSSKPETTVHNSEGI
TLTATARNARDELMPGQIITFSVTPEGAALSNTGEILTDQSGQAKVTLTSDKVNVYTVTA
TMGKDVPVQSQVTVAVKADAKTAHVVSVVASPDTITADGVDSSTITSRVEDDYGFPVEGV
DVSYTLDTKGRPVVNIPTTRTDQSGQVTATITSTLAETLTVNVQVPGTANQSAAITLLAS
TADESKSLLKSDVGTLMADYQHSAKLTLTLQDKYGNPIVTSDHLEFVQSGPFVNFLKLSD
IDYSQRNYGEYTVTVTGGKEGTATLIPMLNGVHQANLSVSLNLIRSIKEMSGHVTANNHT
FSTAQFPSEGFAGAYYTLNNDNFEAGKTVDDYMFSSSQSWVSVDASGKVSFANIGDQTSV
TISAVPRQGGTTYQTLIKLKGWWVNNGNHTNIWLAANALCHAKNDGYNLPGITHLTSGEN
KRTQGSLYGEWGNVGAFSSNSQFTQGAYWTSESDDYNRHYYVQMLTGMTGSDADSSPQLT
ACRKSL
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacaaatgcgcatcaaataaaaaataatgatcaaaactctttatgtggtctg
ggtgacaaaatacgccgcctgaccgccggagtttgtttatttacccaaatttttttcccc
gtcatggcgacggcacaaaatgtggtacacgctaaacctcagacgacagtttcatctgcg
ccccctctactagaaaataatactgtgccttacacgcttggtgcgctggaatcagcgcaa
agcgttgctgatcgattcggtatttcactggaggagcttcgtcgtcttaatcagttccgt
acttttgctcgcggctttgataacgtgcgccagggtgaagagctggatgttccggcaaca
accttgcagaaaagtcatgagcaacaaaatgccgtaccgcctgcgaatggcgaaaacacg
ctggagaatcaaatagccagcacttcgcagcgagttggcaccctgctttcacaagatatg
aatagtgagcaggccagcggcatggcgcgtggttgggcgtcttcagaagcctcaggcgcg
atgactgattggttaaataactttggcactgcgaaaatctctctgggtgtggatgaagat
ttcagcctgaaaaattcgcaattcgacttcctgcatccgtggtatgacacacccgattat
ctgctcttcagccagcatacccttcaccgaacagacgatcgtacccagatcaacaccggt
ttgggctggcgtcatttcacccccagctggatgtcaggcatcaacctgttttttgaccac
gacctgagccgctatcactcccgcgcgggtcttggcgcagaatactggcgtgattatctg
aagttgagcagcaacgcttatatcggcctgactggctggcgtagcgcaccggaattggat
aatgactacgaagcccgcccggccaacggctgggatttacgcgcggaaggctggttacca
gcctggccacaactgggtggaaaactggtctatgaacaatactatggtgatgaagtggcg
ctgtttgacaagaatgatcgccaaagtaatccccatgctattaccgcgggcctcaactat
acccccttcccgcttctgactctcagtgcggaacagcgtcaggggaaacaaggtgaaaat
gacacacgttttgccgttgatctgacctggcaacccagcagttcaatgcagaaacagctt
aacccggacgaagtggccggacggcgcagtctggccggtagtcgttatgatctgattgat
cgcaacaacaacatcgttctggaatatcgcaagaaagagctgattcgcctgagtctgctg
gatccggtgaaaggaaagtctggagaaataaaaccgctggtttcctcgatacagaccaaa
tatgccctgaaaggctataacatcgaagccgctgcgctggaagctgccggaggtaaagtc
agcacgtctggaaaagatatcacggtcacgctgccaggttaccgcttcactaacactcca
gaaaccgataatacatggtcgatagacgttaccgccgaggatgtaaaaggtaacctgtca
cgtcatgaacaaagcatggtcgtcattcaggctccgacattaagccagaaagattctctg
ttatccgttaatccgctaaccgtggctgcagataaaaaatcgacgaccacattgaccgtt
actgcgcacgattccgacggaactccggtgccggggctggcgctgcaaacccgcagtgaa
ggcgttcaggatatcaccctgtctgactggacagataacggtgatggtagttacacacag
atgctgaccgccggaacgacatcaggttcagtaacactgacgccgcaaattaacggtgag
agtgcggtaaaagaatccattgtcgttaatatcgtccctgttgtctcatcccgcgaccat
tcatcaataacaatagataacgtatcgtattatgccggagacgacatcaaggttagggtg
gaactgaaagacgacagcaatcaaccggttgcttatcaaaaagaagaattggtaaaagcc
gttactgtcgaaaacagcaaacctggcgccacgattgtctggcacgaagagcagccgggg
gtttatgccgcgaattatccggcccataagcaagggacagcactaagggcacaacttagc
cttcacaactggaatgctccactgcaatcgcatatttataacattgaggcaaaccagaat
aaggctcgcgtcgccacattatcagcgacgaataatgacgtttacgccgataaaaagaca
tttaataccctcactatcaacgtcactgatgagagtgataatcccctgacaaatcatcag
gtcacctttaagaatgaaaaaggaagcgctgaatttgtcgaaccgccgcagcaaaatacg
gatgcatatggtgttgccacaatcaacatggtaagtcaggttgcggaagaaaatacgatt
agcgccacgctgccaaatggtttctcacaacggataattgcgaaattcgttagcgattcg
agtacgccaaaattcaaacaactggttgccgatccagataccattattgctggcaacagc
cagggcagtactctgaccgccaccgtcacagactttcataacaacccgttaaaagatatg
aaagtgaattttgtggcacctggtggctcgcaactggacaacacgtccgccacaacagac
cagtccggtattgtgcgagtgcacctgaccagttcaaaagctggtagctattccgtcgat
gcctcgcttgaggcggataaaaatattcaccagtcggtcacgatcaccgtggtcccaaac
agggaacaatcggtaatgaccttaaatgccgggtcgggcagtgcgatcgctaacaataca
aataccgttatcctgacagccagtgtgaaagatgtttatggacacccgttgccggatgag
gatgtgaaatttaccttgccagcctccatgaccgggaacttcacgctaagtagtgaaacc
gtccgcaccgatgcaaacggtgatgccgtggttacattgcgaggcacaaaagcgggtgag
tttacagttacggcgacgctgaccagaaataacaccgttgctcatcagcaagtcactttt
attggggatacaaacagtgcgcagctccagccgctgactgcctcattaaataccattgtt
gcgggtaacagtacggggagtaccctgacggcaacgatcctggacgcttaccaaaatccg
cttaaagaccagctggtcactttccagagtaacgatgtcactctaagcggaacagaagtc
accaccgatacgctgggtcaggcgacggtaacaatgaccagcaatattgccggacaacat
aacgtcgtggtgagccggaaagcgcaaccctccgataataaaacgtttagtttattagtg
ctgccggatgaaagttcggcgaaggtaataagtataaccggagccgaaaaaacgataacg
gttggcgaaaacatcacgctacggatactcgtccaggacgcgtttaacaatgtaatagcg
ggtcaacgcgtcagattaagtgcgcagccaacagctaacattacgataggcgatacggct
tacaccgataataacggttacgcgtacgttaaccttctcagcacccagccagggttttat
caggtgacggcaacgctggacaataacagtagtagtaaggttgacgtgaatgtggcaaat
ggcaaactcgagttaacatcatcgaagccagaaaccacggtccataacagtgagggtatt
acgcttaccgcaacggcgagaaatgcgcgggatgaattgatgcctgggcaaattatcacc
tttagcgtaacgcctgaaggtgcagcgctaagcaatacaggggaaatccttactgaccag
tctggtcaggccaaagtgacgctgaccagtgacaaagtgaatgtctataccgttacggcc
acaatgggcaaagatgttcccgttcagagccaggtaacggttgcggttaaggcagatgct
aaaacggcacatgttgtgagcgtcgtggcttctcctgacaccataaccgccgacggcgtt
gatagcagcaccatcacttcacgagtagaagatgattacggattcccggttgaaggtgtc
gatgttagttataccttagacaccaaaggtcgcccggtagttaatattccaactacgcgt
accgatcagtccgggcaagtcacggcgacaataaccagtacattggcagaaaccttaacg
gtcaatgtgcaagttcctggtacagccaaccaatccgcagctattaccttgcttgccagc
acggcggatgaaagtaagtcattattgaaatccgacgttggcactctgatggctgactac
cagcatagcgcgaaacttacgctaacattgcaagacaagtacggtaacccgatagtgacg
tctgatcatctggaatttgtccagtcaggtcccttcgtgaactttctcaagttgagcgat
attgattacagccaaagaaattatggcgagtacaccgtgactgtcactggcggaaaagag
ggaacagcgactctcattcccatgctgaacggggttcatcaggcaaacttaagcgtatcg
ctgaatctcatccgctcgataaaagaaatgtccggtcatgtcactgcaaacaaccatacc
ttctccacggctcaattcccgagcgaaggttttgcaggagcgtattacacactcaacaat
gataactttgaagcgggtaaaaccgttgatgattatatgttttcaagttcacagagttgg
gtgtctgtcgatgcttcaggtaaggtttctttcgcaaatatcggcgatcaaacgtcagtc
acaataagcgctgttccccgacaaggaggtacaacctaccagaccttaattaagctgaaa
ggctggtgggtgaataatggaaatcataccaatatctggctagctgccaatgcgctctgt
catgctaaaaatgatggatataatcttcctggcatcacacatttgacgtctggcgaaaac
aaacgcacgcagggatcactgtatggtgaatgggggaacgttggagcgttttccagtaat
tcgcaatttacacaaggagcttactggacaagtgaatctgatgattacaatcggcactac
tatgtgcagatgctaacgggtatgactggaagcgacgctgattccagcccccaactgacc
gcctgccgtaaatcactttaa
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integrated database retrieval system
