Shigella sp. PIB: LXH19_19995
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Entry
LXH19_19995 CDS
T10707
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
shig Shigella sp. PIB
Pathway
shig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LXH19_19995 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shig03019
]
LXH19_19995 (orn)
03009 Ribosome biogenesis [BR:
shig03009
]
LXH19_19995 (orn)
Messenger RNA biogenesis [BR:
shig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LXH19_19995 (orn)
Ribosome biogenesis [BR:
shig03009
]
Eukaryotic type
Pre-60S particles
RNases
LXH19_19995 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
USJ81729
LinkDB
All DBs
Position
complement(4218470..4219015)
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggatcgatcttgaaatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaacctgaatattctg
gcagaagggccgaccattgcagtacaccagtctgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtggagcgcgtgaaagcgagcacaatg
ggcgatcgtgaagctgaactggcaacgctcgaattcttaaaacagtgggtgcctgcggga
aaatcgccgatttgcggtaacagcatcggtcaggaccgtcgcttcctgtttaaatacatg
ccggagctggaagcctacttccactaccgctatctcgatgttagcaccctgaaagagctg
gcgcgccgctggaagccggaaattcttgatggctttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagttggcttactaccgcgagcattttatcaag
ctgtaa
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