Shigella sp. PIB: LXH19_21765
Help
Entry
LXH19_21765 CDS
T10707
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shig Shigella sp. PIB
Pathway
shig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LXH19_21765 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shig03019
]
LXH19_21765 (recQ)
03400 DNA repair and recombination proteins [BR:
shig03400
]
LXH19_21765 (recQ)
Enzymes [BR:
shig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LXH19_21765 (recQ)
Messenger RNA biogenesis [BR:
shig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LXH19_21765 (recQ)
DNA repair and recombination proteins [BR:
shig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LXH19_21765 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
USJ84423
LinkDB
All DBs
Position
complement(4618475..4620304)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCCTGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMAL
TATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggagtccggagctaaacaggttttacaagaaacc
tttggctaccaacagtttcgccccggccaggaagagattatcgacactgtgctttccggt
cgcgattgcctggtcgtcatgcccactggtggcggaaaatccctttgctatcaaattcct
gctttattgctaaacggccttaccgtggttgtttcaccgctgatttcgttgatgaaagat
caggtggatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacgcaaacc
cgcgaacagcaacttgaagtgatgacaggctgctgcaccgggcaaattcgtctgctttat
atcgccccggaacgcctgatgctggataactttcttgagcatctggcgcactggaatccg
gtgttattagccgttgatgaagcgcactgtatctcccaatggggccacgatttccgcccg
gaatatgccgcgctcggtcagttgcgccagcggttcccgacgctgccgtttatggcgctg
accgccacagccgacgacaccacgcggcaggatatcgtgcgcctgctggggctgaacgat
ccgctgattcaaatcagcagttttgaccgtccgaatattcgctacatgctgatggagaaa
ttcaaaccgctcgatcagttgatgcgctacgtgcaggaacaacgcggtaagtcggggatt
atttactgcaacagccgggcgaaagtagaagacaccgctgcgcgcctgcaaagcaaggga
attagcgcggcggcctatcatgccgggctggaaaataatattcgcgccgacgtgcaggag
aaattccagcgcgatgacctgcaaattgtggtggcgacggtggcgttcggcatgggcatc
aacaagcctaacgttcgcttcgtggtgcattttgatattccgcgcaatatcgaatcctat
tatcaggaaaccggtcgcgccgggcgtgatggcctgcccgcggaagcgatgctgttttac
gatccggccgatatggcgtggctacgccgttgtctggaagagaagccgcaggggcaattg
caggatatcgagcgccataaactcaatgcgatgggcgcgtttgccgaagcgcaaacttgc
cgtcgtctggtattgctgaactattttggcgaagggcggcaggagccgtgcgggaactgc
gatatctgcctcgatccgccgaaacaatacgatggttcaaccgatgctcagattgccctt
tccaccattggtcgggtgaatcagcggtttgggatgggttatgtggtggaagtgattcgt
ggcgctaataaccagcgtatccgcgactatggtcatgacaaactgaaagtctatggcatg
ggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcacctcggc
ctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcgcgtccg
gtgctgcgcggcgaatcctctttgcaacttgccgtgccacgtatcgtggcgctcaaaccg
aaagcgatgcagaaatccttcggcggcaactacgatcgcaaactgttcgccaaattacgc
aaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtgtttaacgac
gcaaccttgattgagatggctgaacagatgccgatcaccgccagcgaaatgctcagcgtt
aacggcgttgggatgcgcaagctggaacgctttggcaaaccgtttatggcgctgattcgt
gcgcatgtcgatggtgacgacgaagagtag
DBGET
integrated database retrieval system
