KEGG   Shigella sp. PIB: LXH19_22805
Entry
LXH19_22805       CDS       T10707                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shig  Shigella sp. PIB
Pathway
shig03030  DNA replication
shig03430  Mismatch repair
shig03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LXH19_22805
   03430 Mismatch repair
    LXH19_22805
   03440 Homologous recombination
    LXH19_22805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shig03032]
    LXH19_22805
   03400 DNA repair and recombination proteins [BR:shig03400]
    LXH19_22805
Enzymes [BR:shig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LXH19_22805
DNA replication proteins [BR:shig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LXH19_22805
DNA repair and recombination proteins [BR:shig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LXH19_22805
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 RNase_H_2 DUF7317
Other DBs
NCBI-ProteinID: USJ84476
LinkDB
Position
pPIB-1:complement(78930..79778)
AA seq 282 aa
MNNDELATRRAQAIAEDRCFSKGRLRDEFRMKPAPGAEPVKWYKNTYGGRFAVYRIADCV
PMREKCPLTSKQQLAGQRLSVLSRLNSTSGRMARQAYDWLSLAPLFLDTETTGLDNTAEA
LEIGLTDAAGQVVFETRLKPTVAIGAQAAAVHGISEQALCGAPSWTDVARQLRHAIGDRP
VIIFNARFDIRILKQTAAAHSDPADWLEELTVYCAMELAAGYYGATYRYGTISLACAASQ
AGLTWEGQAHSAIADARMTAGVVNAIAAYHLELLQEQARLKI
NT seq 849 nt   +upstreamnt  +downstreamnt
atgaataatgatgagctggccaccagacgtgcgcaggcgattgccgaagacaggtgtttc
tcgaaaggacgtttgcgcgatgaattcagaatgaaaccagcccccggtgctgagccggtt
aagtggtataaaaacacttatggtggcaggttcgctgtataccgaattgcagactgtgtt
ccgatgcgtgagaaatgccctctgacgagtaaacaacagctggctggccagcgactttcc
gttttatccagacttaacagcaccagtggccggatggcacggcaggcatatgactggctg
agtctggcaccgctctttctggatactgaaacgacaggactggataataccgcggaagcc
ctggaaatcggcctgaccgatgcggccggtcaggtggtatttgaaaccaggctgaagccc
acggtcgccatcggggcgcaggccgccgctgtgcatggtatcagcgagcaggctctctgc
ggcgcaccatcatggacagatgtggcgcggcaactgcgtcatgcaatcggggaccgacca
gtaattatctttaatgcccggttcgacatccgcattctgaaacagactgctgccgcacat
agcgatccggctgactggctggaagaactgacggtatattgtgcgatggagctggctgca
ggatattatggggccacctaccgctatggcacgatttcactggcctgtgctgccagtcag
gccggactgacctgggaagggcaggcacactcagcgatcgccgacgcacggatgacggca
ggggtggtaaacgctattgctgcatatcatctggaactgctgcaggaacaggcacggctg
aaaatctga

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