KEGG   Shigella sp. PIB: LXH19_23520
Entry
LXH19_23520       CDS       T10707                                 
Name
(GenBank) VirB4 family type IV secretion system protein
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
shig  Shigella sp. PIB
Pathway
shig03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shig00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LXH19_23520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shig02044]
    LXH19_23520
Enzymes [BR:shig01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     LXH19_23520
Secretion system [BR:shig02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   LXH19_23520
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG
Other DBs
NCBI-ProteinID: USJ84694
LinkDB
Position
pPIB-3:complement(20146..22503)
AA seq 785 aa
MHKIKLKNSDNMDVAREYPDYRFHVTDSIIFTSDRKMLASLVVAGIPFETENDNVLTNLF
NSVKNFLIGLGKEGDLYLWTHLIKKRATINGEWNFDNDFLSRFSKKYLALFTSSAFYKST
WYLTFGIPYDDVDTGIERMNEMTQQAQKALLPFNASLLSVYNTYISEVADYLSLLLNAEH
NMIPLSSTPLSSSICDSEWYFGADVLELRNNESDSKKFATNYILKDFPIETTPGQWDFLL
KQPYEFILTQSFIFESPTKTLKNIDSQLNKLQSANDAAKIQQEELEAGKEAVAAGITLFG
SLHCALTVFGDTPDQARSNGIKLSAEFITSGKGFRFSRASLASPFVFFSHMPLNKRRPLD
TRRTITNLACLMSFHNYSSGKKSGNPIGDGSAIMPLKTDSGSVYWFNTHYSPPEKNVTGQ
KIAGHAMFLGATGTGKTTFEATASGFLQRFDPLMFVVDYNRSTELFVRAYGGSYFTLQEG
IYTGCNPWQLAEGPESPVWHRLLAFLKRWTQVLARDNQGNPCSDEHGIELNAAVESIMRM
PVEERRTALLLDIVSPELQTRLAKWCDNGEYAWAVDSPRNTFNPLHHKKVGFDTTVVLDT
KNGIHPACEPLLAVLFFYKEIMQRGGNLMLSIIEEFWMPANFPMTQSMIKSALKAGRMKG
EMMWLTSQSPEDAINCAIFAALVQQTATKILLPNPDAKWEGYKEIGLTEKEFEKLKELTK
ESRTMLIKQSGSSVFAKMDLFGFDEFIPVLSGSETGLSIFDEIIAEKGDVAPDIWIPELL
KRLNG
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgcacaaaatcaaattaaaaaacagtgacaatatggatgttgctcgtgaatatcccgat
tatcgcttccatgtaacagacagtattatctttacttctgacagaaaaatgctggcttca
cttgttgtagcaggcattccatttgagacggagaacgataatgttcttacaaatttattt
aacagcgttaaaaacttcctgattgggttaggaaaggaaggcgacctgtatttatggact
catcttatcaagaaaagagcaaccatcaatggagaatggaattttgacaatgatttttta
agcaggttttcaaaaaaataccttgctctgttcacatccagcgcattctataaatcaaca
tggtatctgacatttgggattccctacgatgatgttgataccggaatcgagcgcatgaat
gaaatgacacaacaggcgcaaaaagcacttctaccatttaacgcttctttattatccgta
tacaatacttatattagtgaggtggcagactatctatcactattgctaaatgcagaacat
aacatgattcctttatcatccacccccttatcatccagtatttgtgattctgaatggtat
tttggtgctgatgttcttgaactgcgtaacaacgaatcggatagtaaaaaattcgcaacg
aattatattttgaaggatttcccgatagaaacaacccccggacaatgggatttccttctc
aaacaaccctatgaatttattcttactcaatcctttatttttgagtcaccaacaaaaacc
ctgaagaatatcgattcacagttaaacaaactacaatcagctaatgatgcagccaaaata
cagcaggaagaactcgaagctggtaaagaagcggtcgcagccggaattacgttgtttggt
tcactacactgcgcattaacggtattcggtgatacaccagatcaggccagaagcaatggt
ataaagctctctgctgagtttattacttcgggtaagggattccgcttcagtcgcgcctca
ctcgcatcaccttttgtttttttcagtcatatgccgctgaataagaggcgtccactggat
acccgaagaacaattaccaacctggcctgtctgatgtcttttcacaattattcctccggg
aaaaaatcaggcaatcctattggtgatggctccgccataatgcctttaaaaacggattca
ggcagcgtttactggttcaatacacattacagcccaccggaaaaaaatgttaccgggcaa
aaaattgccggacacgcaatgtttcttggcgcaacaggcacagggaaaacaacatttgaa
gcaacagccagcggctttcttcaacgctttgaccctttaatgtttgttgtggattacaac
cgttctaccgaactttttgtccgcgcatacggagggagctatttcacattgcaggaaggt
atctataccggctgcaatccgtggcaactggcagaaggcccggaatctcccgtctggcac
agacttctcgcatttctgaaacgctggacacaggttctggcacgagacaaccagggcaac
ccctgttctgatgaacatggcattgaattaaacgctgccgtggaaagcattatgcgaatg
cctgtcgaagaacgccggacagcccttcttctcgatatagtcagtcctgaacttcagacg
cgtctcgccaaatggtgcgacaacggcgaatatgcctgggcggtggattccccccggaat
accttcaatccactgcatcataaaaaagtgggatttgatacaaccgttgtcctggacaca
aaaaacggtattcatcctgcctgtgaacctttactcgcggtcctgtttttctacaaagaa
atcatgcaacgcggcggcaatctgatgctctccattattgaagagttctggatgccagca
aactttcccatgacacaaagcatgattaaaagcgcactgaaagcggggcgcatgaaaggt
gaaatgatgtggttaacatcacagtccccggaagacgccataaactgcgcaatttttgcg
gcgctggtacaacaaaccgcaacgaaaattctcctgcccaatcccgatgcaaaatgggaa
ggatataaagaaattgggcttactgaaaaagagtttgaaaaactcaaagaactgacgaag
gagtcaaggaccatgctcatcaagcaatctggctcttctgttttcgccaaaatggatttg
tttggattcgatgagtttatccccgtgctttctggctctgaaactggcctgtctattttt
gatgagattattgctgaaaaaggagatgtagctcctgatatctggataccagaactcctg
aaacgcctgaacggttaa

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