Shinella sp. XGS7: LHJ69_00285
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Entry
LHJ69_00285 CDS
T10581
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
shin Shinella sp. XGS7
Pathway
shin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LHJ69_00285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_00285
Transporters [BR:
shin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LHJ69_00285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DUF6116
Motif
Other DBs
NCBI-ProteinID:
UDF35572
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Position
76977..78236
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AA seq
419 aa
AA seq
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MSALILAVFLLAAVAAMPIAHALLVAAMSAAAASDKVPLDLLVQQMVAQVQSFPLIAIPF
FMLTGTLMMGGRLGEALVGVLSTLIGRFHGGPAQVGVLSSTLFGGVSGSAVADASAIGSL
LIPWHKRLGYPAAFSAATLAAAATIDILIPPSIPMILFALSSNASIASLFVAGVLPGIVM
CGGFMAACWWVGKRRNFPRETAPFDGPGFRRHLLYASPAVVLPVLIIIFLRFGIATPTEV
AVLSTLYAGLVSVLIYRDLDWKRLNAAIVHAGLATGVVLLVIMASAAIGWLLTFDQMPQG
IAAWVQEHVHAKWLVILIMNLLMLALGMFIDLPAAVLLLTPVFVPLAQGIGMDMVQLGIM
MVVNLAIGLYTPPVGTTLFITSALAKVKVGQTVRELGPFYLVAFGVLALVSYVPASILR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcactcattcttgccgtgtttctgctggcggccgtggcggccatgcccattgcc
cacgccctgctggtggcggccatgagcgccgccgccgcctccgacaaggtccccctcgat
ctgctggtgcagcagatggtggcccaggtacagagcttcccgctgattgccattcccttc
ttcatgctcaccggcaccctgatgatgggcgggcggctgggcgaagccctggtgggggtg
ctgtccacgctgatcggccgcttccacggcggccccgcccaggtgggcgtgctgtcatcc
accttgttcggcggcgtttccggctcggcggtggcggacgcctcggccatcggatcgctg
ctgattccctggcacaagcgcctgggttacccggcggccttctcagccgccacgctggct
gctgcggccacgatcgacatcctgatcccgccctccatcccgatgatcctgttcgcgctg
agctcgaacgcctccatcgcctcgctcttcgtggcgggcgtgctgcccggcatcgtgatg
tgcggcggtttcatggcggcctgctggtgggtgggcaagcgtcggaacttcccccgcgaa
accgcgcccttcgacggcccgggctttcgccgccatctgctgtacgccagcccggccgtg
gtgctgccggtgctcatcatcatcttcctgcgattcggcatcgccacgccgaccgaggtg
gccgtgctgtcaacgctctacgccggcctggtgtccgtgctgatttaccgagacctcgac
tggaagcggctcaatgccgccatcgtccacgcaggcctggccaccggagtggtgttgctg
gtcatcatggcctcggcagccatcggctggctgctgaccttcgaccagatgccgcagggc
atcgcggcctgggtgcaagaacatgtgcatgcgaagtggctggtcatcctgatcatgaac
ctgctgatgctggccctgggcatgttcatcgacctgccggccgccgtgctgctgctcacg
ccggtcttcgtgccgctggcccagggcatcggcatggacatggtgcaactcgggatcatg
atggtggtgaacctggcgatcggcctgtacaccccgccggtgggcaccacgctcttcatc
accagcgccctggccaaggtcaaggtcggccagacggtgcgcgagctggggccgttctac
ctggtggccttcggcgtcctggctcttgtgtcctacgtacccgccagcatcctgcgctga
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