KEGG   Shinella sp. XGS7: LHJ69_00510
Entry
LHJ69_00510       CDS       T10581                                 
Name
(GenBank) adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
shin  Shinella sp. XGS7
Pathway
shin00230  Purine metabolism
shin00240  Pyrimidine metabolism
shin01100  Metabolic pathways
shin01232  Nucleotide metabolism
Module
shin_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
shin_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:shin00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    LHJ69_00510
   00240 Pyrimidine metabolism
    LHJ69_00510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shin03400]
    LHJ69_00510
Enzymes [BR:shin01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     LHJ69_00510
DNA repair and recombination proteins [BR:shin03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    LHJ69_00510
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: UDF35615
LinkDB
Position
complement(120842..123808)
AA seq 988 aa
MSSDQPQLLSPTLLASPASLPAQEISAEVLQEKYAKGEERALDEVRQRVAQALAQAEALE
QRAAWAARFLDAQRRGFIPAGRILSAAGTDLAATLINCFVQPVGDSIATAEDGEPGIYTA
LTEAAETMRRGGGVGYDFSRIRPQGAWVGSTRSHASGPVSYMRVFDRSCETVESAGARRG
AQMGVLRCDHPDIEAFIHAKDQGDLRNFNISVGVTDSFMQAVIEGTTVELVHRAEPSEAQ
KAAGAYQRGDGLWVYRKPPARALWDQIMRSTYDHAEPGVLFLDRINNDNNLYYCETIAAT
NPCAEQPLPPYGCCCLGSVNLTLFVRDPFTPEARFDEAEFAEVCGVATRMLDNVLDVTPW
PLPAQAQEARNKRRIGLGFTGLGDALVMLNLRYDSEAARAQARQISEIMRDAAYAASADL
AQEKGAFPLFNADLYLSGGNFASRLPQGLKDKIRAQGLRNSHLLSIAPTGTISLAFADNA
SNGIEPAFSWAYTRKKRLGQAEGGGFKEYQVEDHAWRLYRHLYGEQAPLSEAFVTALELR
AADHAAMVAAVAPYVDTSISKTVNVPADYPYADFQDLYTQAWKSGLKGLATYRPNSVLGS
VLSVTPSPVPAAAAAEPPPLDIISNARLKLERVPKAVLASLRWPSRPELPGGNPAWSYMI
RHPHGDFALFVGELPAEGPDAGLFGKTLPFEVWVNGAEQPRGLSALAKTLSMDLRSNDAA
WLRLKLDALATVAEERAFQMPVPPGGEPRLFPGVVAATAAVIRWRCEQLGALQEGGPTPV
MDAMFSVEEPRTTVSGTLAWAVDVENPATGEQFTLTLKEISLPTPEGGHITRPCALGFSG
NYPKALDGLARLLSLDMRVLDPAWIGMKLRKLLNVGEPLAHFMAPVPSLAGERRQQIWPS
TVAYVARLIIHRYAMLGVLDESGQPLVDMGLLQAAPQAAGSAAAAAAAAGTAVSAMAGRP
CPECGNATMIHKDGCDFCTSCGYVGQCG
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgtccagcgatcagccccagctcctcagtcccacgctcctggccagcccggccagcctg
ccggcccaggaaatcagcgccgaggtgctgcaggagaaatacgccaagggcgaggagcgg
gcgctggacgaggtgcgccagcgcgtggcccaggccctggcccaggccgaggcgctcgag
cagcgcgccgcctgggcggcccgtttcctggacgcccagcgccgcggcttcatcccggcc
ggccgcattctgtcggccgcgggcaccgatctggccgccaccctgatcaactgctttgtg
cagccggtgggcgactccatcgccaccgccgaggacggcgaacccggcatctacaccgcc
ctgaccgaggccgccgaaaccatgcgccgcggcggcggcgtgggttatgacttcagccgc
atccgcccccagggcgcctgggtgggctccacgcgcagccatgcctccgggccggtgagc
tatatgcgggtcttcgaccgcagctgcgagacggtggagagcgcgggcgcgcgccgcggc
gcccagatgggcgtgctgcgctgcgaccacccggacatcgaggctttcatccatgccaag
gaccagggcgacctgcgcaacttcaatatctcggtgggcgtgaccgacagcttcatgcag
gcggtgatcgagggcacgacggtggagctggtgcaccgcgccgagcccagcgaggcccag
aaggccgccggcgcctaccagcgcggcgacgggctctgggtctaccgcaagccgcccgcg
cgcgcgctgtgggaccagatcatgcgcagcacctacgaccatgccgagcccggcgtgctc
ttcctggaccgcatcaacaacgacaacaacctctactactgcgagaccatcgcggccacc
aacccctgcgccgagcagcccctgccgccctatggctgctgctgcctgggctcggtgaac
ctgacgctctttgtgcgcgatcccttcacgcccgaggcccgcttcgacgaggccgagttt
gccgaggtctgcggcgtggccacgcgcatgctggacaacgtgctggacgtgacgccctgg
cccctgccggcccaggcccaggaggcgcgcaacaagcgccgcatcggcctgggcttcacc
ggcctgggcgacgccctggtgatgctgaacctgcgctacgacagcgaggccgcccgcgcc
caggcgcgccagatcagcgagatcatgcgcgacgcggcctatgccgcctcggccgatctg
gcccaggagaagggcgccttcccgctcttcaatgccgatctctacctctccggcggcaac
ttcgcctcgcgcctgccccagggcctgaaggacaagatccgcgcccagggcctgcgcaac
tcgcacctgctctccatcgcgcccacgggcaccatcagcctggcctttgccgacaatgcc
agcaatggcatcgagcccgccttcagctgggcctacacgcgcaagaagcgcctgggccag
gccgagggcggcggcttcaaggagtaccaggtcgaggatcatgcctggcgcctgtaccgc
catctctatggcgagcaggccccgctgtccgaggccttcgtcaccgcgctggagctgcgc
gcggccgaccacgcggccatggtggcggcggtggcgccttatgtggacacctcgatctcc
aagacggtcaatgtgccggccgactacccctatgccgacttccaggacctctacacccag
gcctggaagagcgggctcaagggcctggccacctaccggcccaatagcgtgctgggctcg
gtgctcagtgtgacgcccagcccggtcccggcggccgcggccgccgagccgcccccgctg
gacatcatcagcaatgcgcgcctgaagctggagcgcgtgcccaaggccgtgctggcctcg
ctgcgttggcccagccggcccgagctgcccggcggcaacccggcctggagctacatgatc
cgccacccgcatggcgacttcgcgctcttcgtgggcgagctgccggccgaggggccggat
gccggcctcttcggcaagaccctgcccttcgaggtctgggtcaatggcgcggagcagccg
cgcgggctctcggccctggccaagaccctgtccatggacctgcgcagcaatgacgcggcc
tggctgcgcctcaagctcgacgccctggccaccgtggccgaagagcgtgccttccagatg
cctgtgcctccgggcggcgagccgcggctctttcccggtgtggtggcggccacggcggcg
gtgatccgctggcgctgcgagcagcttggcgccctgcaggagggcggacccacgccggtg
atggatgccatgttcagcgtggaggagccgcgcaccacggtctccggtaccctggcctgg
gcggtggatgtggaaaaccccgccaccggcgagcagttcacgctcacgctcaaggagatc
agcctgcccacgcccgagggcgggcacatcacgcgaccctgcgccctgggcttctcgggc
aactatcccaaggccctggacggcctggcgcgcctgctctcgctggacatgcgggtgctg
gacccggcctggatcggcatgaagctgcgcaagctcctgaatgtgggcgaacccctggcg
cacttcatggcgccggtgcccagtcttgccggcgagcgccgccagcagatctggccctcc
accgtggcctatgtggcccgcctcatcatccaccgctacgccatgctgggcgtgctggac
gagagcggtcagcccctggtggacatgggcctgctgcaggccgcgccgcaggcggcggga
tcggccgccgcggccgccgcggccgccgggacggccgtgagcgccatggcgggccgcccc
tgcccggagtgcggaaacgccaccatgatccacaaggatggctgcgatttctgcaccagt
tgcggctatgtggggcagtgcggctga

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