Shinella sp. XGS7: LHJ69_00785
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Entry
LHJ69_00785 CDS
T10581
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
shin Shinella sp. XGS7
Pathway
shin00280
Valine, leucine and isoleucine degradation
shin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LHJ69_00785
Enzymes [BR:
shin01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
LHJ69_00785
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
LAL_C2
HlyD_3
RnfC_N
ATP-grasp_3
GCV_H
HlyD_D23
GARS_A
DUF1611_N
DUF2118
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
UDF35665
LinkDB
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Position
complement(181195..183207)
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AA seq
670 aa
AA seq
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MFKKILIANRGEIACRVIRTARRMGIQTVAVYSEADARAKHVQACDEAVLIGGPAPKDSY
LQWQRILEAAKATGAQAVHPGYGFLSENEDFAQACAEAGLVFIGPPPSAIKAMGLKAESK
RLMEAAGVPLVPGYHGADQDPALLKREAERIGYPVMIKASAGGGGKGMRAVYAAEEFEAA
LASCQREAINSFGDDAVLIERYVQRPRHIEVQVFGDGHGNVVHLFERDCSLQRRHQKVIE
EAPAPGMTAEMREAMGAAAVRAAAAIGYSGAGTVEFIADVSEGLRQDRFYFMEMNTRLQV
EHPVTEAITGLDLVEWQLRVAAGEPLPKGQDALSIDGWAFEARLYAENPARDFLPATGTL
SVARWPAHVSFERGDVRIDSGVGEGDAISPFYDSMVAKLIVWGETREQALARLDAALRDT
HIVGLQTNVAFLRRCAATASFAGADLDTALIERERAALFEQPGLALDVAAAAVVAHTLAA
EAAAQRAGDPWSQRDGWRLFGAATRRFELDIAGAHHPVLLSRHHRGGMSLSVAGQVLPFA
VNSHGLERHELLLGEGLAQRRVMATVYGLGEKVAVFTAQGSALVTEVDVIAHAGEGASEA
GRLTAPMPGKMVAFLAQPGDKVSKGQALAVMEAMKMEHQIHAPRDGVVAELLYAVGDQVA
EGSELLKLEA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaagatcctcatcgccaatcgcggcgaaatcgcctgccgggtcatccgcacc
gcacggcgcatgggcattcagaccgtggcggtgtattccgaggcggatgcccgggccaag
catgtgcaggcctgcgatgaggcggtgctgatcggcggcccggcgcccaaggactcttat
ctgcagtggcagcgcatcctggaggctgcgaaggccaccggtgcccaggccgtgcacccg
ggctatggctttctgtcggagaacgaggacttcgcccaggcctgcgccgaggcgggcctg
gtcttcatcggcccgccgccctcggccatcaaagccatgggcctgaaggccgagtccaag
cgcctgatggaagcggccggcgtgcccctggtgccgggctatcacggcgccgaccaggac
ccggccctgctcaagcgcgaggccgagcgcatcggctatcccgtgatgatcaaggcctct
gccggtggcggcggcaagggcatgcgcgcggtctacgcggccgaggagttcgaggccgcg
ctggcctcctgccagcgcgaggccatcaacagcttcggtgacgacgcggtgctgatcgag
cgctatgtgcagcgcccccgccatatcgaggttcaggtcttcggcgacggccacggcaat
gtcgtgcatctcttcgagcgcgactgctcgctgcagcgccgccaccagaaggtcatcgag
gaggcgccggcccccggcatgacggcggagatgcgcgaggcgatgggcgcggctgcggtg
cgcgcggcggcggccatcggctatagcggcgcgggcacggtggagttcatcgccgacgtg
tccgaaggcctccggcaggaccgcttctatttcatggagatgaatacgcgcctgcaagtg
gagcatccggtgacggaagcgatcaccggcctcgatctcgtcgaatggcagcttcgcgtc
gccgccggcgagcccctgccgaaagggcaggatgcgctctccatcgacggctgggccttc
gaggcgcggctctatgccgaaaacccggcgcgcgatttcctgcccgccaccggcacgctg
agtgtggcgcgttggccggcgcatgtcagcttcgagcgcggcgatgtgcgcatcgactcg
ggcgtgggcgagggcgatgccatcagtcccttctacgactccatggtggccaagctcatc
gtctggggcgagacccgcgagcaggccctggcccgcctggatgccgccctgcgcgacacg
catatcgtgggcctgcagaccaatgtggcctttctgcgccgctgcgcggccacggcctct
ttcgcaggggctgatctggacacggccctgatcgagcgcgagcgcgccgcgctcttcgag
cagccaggcctggccctggacgtggcggctgcggccgtggtggcccacaccctggcggcc
gaggcggctgcccagcgcgcgggcgatccctggagccagcgcgatggctggcgcctcttt
ggcgctgccacccgccgcttcgagctggacattgccggcgcccaccatccggtgctgctc
tcccgtcaccaccgcggcggcatgagcctgagcgtggcgggtcaggtcttgccctttgcc
gtgaacagccacggtctggagcgccatgagctgctgctgggcgagggcctggcccagcgc
cgcgtgatggccacggtctatggcctgggcgagaaggtggcggtgttcacggcccagggc
tcggccctggtgaccgaggtcgacgtgatcgcccatgccggcgaaggggcatccgaggcc
gggcgcctgaccgcgcccatgccgggcaagatggtggctttcctggcccagccgggcgac
aaggtgagcaagggccaggccctggccgtgatggaggcgatgaagatggaacaccagatc
catgccccgcgcgacggcgtggtggccgagctgctctatgccgtgggcgaccaggtggcc
gaaggttccgaactcttgaagctggaggcatga
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