Shinella sp. XGS7: LHJ69_00910
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Entry
LHJ69_00910 CDS
T10581
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
shin Shinella sp. XGS7
Pathway
shin00730
Thiamine metabolism
shin01100
Metabolic pathways
shin01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LHJ69_00910 (thiC)
Enzymes [BR:
shin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LHJ69_00910 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UDF35688
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Position
211804..213639
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AA seq
611 aa
AA seq
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MNDRIPQDAQLAQSIALSREPLPASRKTHVAGSLHPALRVPMRAISLTNGETVTVYDASG
PYTDPDAAIDVRRGLPAPRAAWVEARQDTEAYEGRHIQLIDDGLRDQAQQLKLRELSAGL
QRTPRRAKHGHNVTQLAYARAGIVTPEMEFIAIRENLGRQAAKEALVRDGESFGAHVPDF
VTPEFVRQEVASGRAIIPANINHPEAEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMV
WAIRWGADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVNGIAEDLTWEVFRD
TLIEQAEQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHKESFLYEHFE
EICDICRAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTQIAWARDCQVMIEGPGH
VPMHKIKENMDKQLATCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVT
PKEHLGLPDRNDVKVGVITYKIAAHAADLAKGHPAAKIRDDALSRARFEFRWEDQFNLSL
DPETARAFHDETLPKEAHKVAHFCSMCGPKFCSMKITQEVRDYAAAQQGMADKSAEFKAQ
GGELYIPIAKR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccgcatcccccaagacgcccagctggcccagagcatcgcgctcagccgcgag
cccctgcccgcctcccgcaagacccatgtggccggcagcctgcatcccgcgctgcgggtg
cccatgcgcgccatctcgctgaccaatggcgagacggtcaccgtctacgacgcctccggt
ccctacaccgatcccgatgccgccatcgatgtgcggcgcggtctgcccgcaccgcgtgcc
gcctgggtggaagccaggcaggacaccgaggcctacgagggccgccacatccagctcatc
gacgacggcctgcgcgaccaggcgcagcagctcaagctgcgcgagctcagcgccggcctg
cagcgcacgccgcgccgcgccaagcatgggcacaacgtgacccagctcgcctatgcccgc
gccggcatcgtcacaccggagatggagttcatcgccatccgcgagaacctcggccgccag
gccgcaaaagaggctcttgtccgcgacggcgaaagcttcggcgcacatgtgccggacttc
gtcacgccggaattcgttcgacaggaggtcgcgagcggccgggcaatcattcccgccaac
atcaaccacccggaggccgaaccgatgatcatcggccggaacttcctggtgaagatcaac
gccaatatcggcaattccgccgtcacctcctccatggcggaagaggtggaaaagatggtc
tgggcgatccgctggggcgccgatacggtgatggacctctccaccggccgcaacatccac
aacatccgcgaatggatcatccgcaactcgccggtgccgatcggcaccgtgccgctctac
caggcgctggagaaggtgaacggcatcgccgaggacctgacctgggaggtcttccgtgac
acgctgatcgagcaggccgaacagggcgtcgactatttcaccatccatgccggcgtgcgg
ctgcactacatccccctcaccgtgaaccgcgtcaccggcatcgtctcgcgcggcggctcc
atcatggccaagtggtgtctgcaccaccacaaggagagcttcctctacgagcatttcgag
gagatctgcgacatctgccgcgcttatgacgtctccttctcgctcggcgacggcctgcgc
cccggctcgatcgccgacgccaacgacgccgcgcagttcgccgaactggaaaccctcggc
gagttgacgcagatcgcctgggccagggattgccaggtgatgatcgaaggtcccggccac
gtgccgatgcacaagatcaaggagaacatggacaagcagcttgcgacctgcggcgaggcg
cccttctacacgctcgggccactgacgaccgacatcgctcccggctatgaccatatcacc
tcgggcatcggcgcggcgatgatcggctggttcggcacggccatgctctgctatgtcacg
ccgaaggaacatctcggcctgcccgaccgcaacgacgtgaaggtcggcgtcatcacctac
aagatcgccgcccatgccgccgatctcgccaaggggcacccggcggcgaagatccgcgac
gacgcgctgtcgcgcgcccgcttcgagttccgctgggaggaccagttcaacctctcgctc
gacccggagacggcccgcgccttccacgacgagacgctgcccaaggaagcgcacaaggtc
gcgcatttctgctccatgtgcggtccgaaattctgctccatgaagatcacgcaggaggtg
cgcgactacgccgccgcccagcagggcatggccgacaagagcgccgagttcaaggcccag
ggcggcgagctctacatccccatcgccaagcgctga
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