Shinella sp. XGS7: LHJ69_01550
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Entry
LHJ69_01550 CDS
T10581
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
shin Shinella sp. XGS7
Pathway
shin02020
Two-component system
shin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LHJ69_01550
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHJ69_01550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shin02022
]
LHJ69_01550
Two-component system [BR:
shin02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
LHJ69_01550
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Ortholog
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
FleQ
AAA
Mg_chelatase
OKR_DC_1_N
AAA_30
Parvo_NS1
AAA_2
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UDF35779
LinkDB
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Position
346618..348015
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AA seq
465 aa
AA seq
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MSGGARLLLVDDDADLLKLLSMRLGAAGYQVTAVASAEAALAQLAVQRPALVISDVQLPG
QDGLALFDAIRARDATLPVILLTAHGTIPDAVEATARGVYTYLTKPFDGRALLQTIAEAL
ALSAPPAEAAAPPDEALGATTIISRSRVMAELLAEARLVAASEASVLIRGESGTGKELLA
QAIHAASPRAGRPFVAVNCGAIPESLLESELFGHEKGAFTGAVAKHRGLFQAADGGTLFL
DEIGDLPLALQVKLLRVLQERQVRPVGASAAIPVDVRLLSATHRDLDAAMAEGQFREDLY
YRLNVVSLQLPPLSQRREDIPLLAQHFLQRLAQKYRKPLNGFAPEALKALSTAAWPGNVR
QLHNVVEQVCALATTPLIPLPLVQRALRLPGMEVLPYAEARRRFEHAYLVDLLKLTDGQV
ADAARLAERNRTEFYRLLSKHGLTPGLFRQDGASGETPPEPPVAA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcgcgcgcctgctgctggtcgacgacgacgccgacctgctcaagctcctg
tccatgcgcctgggcgcggccggctaccaggtcacggccgtggccagcgccgaggccgcc
ctggcccagctggccgtgcagcgcccggccctggtgatcagcgatgtgcagctgcccggc
caggacggcctggccctgttcgacgccatccgcgcgcgcgacgccaccctgcccgtgatc
ctgctcaccgcccacggcaccattcccgacgcggtggaggccacggcccgcggcgtctac
acctatctgaccaagcccttcgacggccgcgccctgctgcagaccattgccgaggccctg
gccctgagcgcgcccccggccgaggcggccgccccgcccgatgaggccttgggcgcgacc
accatcatcagccgctcgcgcgtgatggccgagctgctggccgaggcccgcctggtggcg
gccagcgaggccagcgtgctgatccgtggcgagagcggcactggcaaggaactgctggcc
caggccatccatgcggccagcccgcgcgccggccggccctttgtggcggtgaactgcggg
gccattcccgagtccctgctggagtccgagctcttcggccatgagaagggcgccttcacc
ggcgccgtggccaagcaccgcggcctgttccaggcagcggacggcggcacgctgttcctc
gacgagatcggcgacctgcccctggccctgcaggtcaagctgctgcgcgtgctgcaggag
cgccaggtgcggccggtgggcgccagcgctgccatcccggtggatgtgcgcctgctctcg
gccacccaccgcgatctggatgcggccatggccgagggccagttccgtgaggacctgtac
taccgcctgaatgtggtgagcctgcagctgccgcccctgtcccagcgccgcgaggacatc
cccctgctggcccagcactttctgcagcgcctggcgcagaagtaccgcaagccgctcaac
ggcttcgcgcccgaggcgctcaaggccctgagcacggcggcctggccgggcaatgtgcgc
cagctccataacgtggtggagcaggtctgcgccctggccaccacgcccctgattcccctg
cccctggtgcagcgcgcgctgcgcctgccgggcatggaggtgctgccctatgccgaggcc
cgccgccgcttcgagcacgcctatctggtggacctgctcaagctcaccgacggtcaggtg
gccgacgccgcccgcctggccgagcgtaaccgcaccgagttctaccgcctgctcagcaag
cacggcctgaccccgggcctgttccggcaggacggcgcctcgggcgagacgccgcccgag
cctcctgtcgccgcctag
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