Shinella sp. XGS7: LHJ69_01895
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Entry
LHJ69_01895 CDS
T10581
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
shin Shinella sp. XGS7
Pathway
shin00280
Valine, leucine and isoleucine degradation
shin00650
Butanoate metabolism
shin00907
Pinene, camphor and geraniol degradation
shin01100
Metabolic pathways
shin01120
Microbial metabolism in diverse environments
shin04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LHJ69_01895
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LHJ69_01895
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LHJ69_01895
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LHJ69_01895
Enzymes [BR:
shin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LHJ69_01895
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
UDF35843
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All DBs
Position
416081..417010
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AA seq
309 aa
AA seq
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MSSNTQAREVLISEVGPRDGLQSVATTMPTAAKQRWVAALHAAGLREIELGSFVPARLLP
QLADTGELIAFARGLPGLATLALVPNRRGAEAAIAAGAHKISLPLSVSEAHSLANVRKTP
QAMLEELRSVLALRREQAPDMGVEVGLSTAFGCTLQGAVDEDAVIRLALACAEAGADDVG
LSDTAGMANPAQVRRLFTRLRRELGERAGAAHLHNTRGLGLANCLAAYEAGVRTFDASLA
GLGGCPYAPGASGNVVTEDLVFMFEAMGVRTGINIERLLAARAPLREGLPQEALYGMLAE
AGLPKGFTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaacacccaggcacgcgaagtcctgatcagcgaggtgggcccgcgcgacggc
ctgcagagcgtggccaccaccatgcccacggccgccaagcagcgctgggtggccgccctg
catgccgccggcctgcgcgagatcgagctgggctcctttgtgccggcgcgcctgctgccc
cagctggccgacaccggcgagctgatcgcctttgcgcgcggcctgcccggcctcgccacc
ctggccctggtgcccaaccggcgcggggccgaggccgccatcgccgcgggcgcgcacaag
atcagcttgcccctctcggtgagcgaggcccattccctggccaatgtgcgcaagaccccg
caggccatgctggaggagctgcgcagcgtgctggccctgcgccgcgagcaggcgcctgat
atgggcgtggaggtgggcctgtccaccgccttcggctgcaccttgcagggcgcggtggat
gaagacgccgtgatccgcctggccctggcctgcgccgaggcgggggctgatgatgtgggc
ctctcggacaccgccggcatggccaacccggcccaggtgcggcggctcttcacgcgcctg
cgccgggagctgggcgagcgtgccggggccgcccatctgcacaacacccgcggcctgggc
ctggccaactgcctggccgcctacgaggccggcgtgcgcaccttcgacgcctccctggcc
ggcctgggcggctgcccctatgcgcccggcgcctcgggcaatgtggtgaccgaggacctg
gtcttcatgttcgaggccatgggggtgcgcaccggcatcaacatcgagcgcctgctggcc
gcccgcgcgccgctgcgcgagggcctgccccaggaggcgctgtacggcatgctggccgag
gccggcctgcccaagggattcactgcatga
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