Shinella sp. XGS7: LHJ69_02385
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Entry
LHJ69_02385 CDS
T10581
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_02385
Transporters [BR:
shin02000
]
Other transporters
Pores ion channels [TC:
1
]
LHJ69_02385
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UDF35939
LinkDB
All DBs
Position
complement(528994..531687)
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AA seq
897 aa
AA seq
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MFKRKATSTAVLIVMGAMASLPALAQDRLERVEITGSAIKRIDAETSVPVTIVKMEDLKA
QGVTSVEQIMSSLSAVQMTQSSSQQVGSSTGGASFANLRGIGSNKTLVLLNGRRIANNAI
DGAAPDLNMIPFAALERVEVLRDGASSLYGTDAIGGVINFITRKDYRGGAITIGVDKPQM
AGGEASTANVGFGYGDLSSQGFNIFGFVDITKTDPIGGEQRPFNQRLPGGLSPTPFPANY
YQNGDVTANPAAPSCTSPSWMVDAGDGTSCYMSTSKFVDYTTKSDRKSAMLRGSLRLAQD
HTLSVEWFTTSNDSISRIAPVPYGTLWMNPRRPDGSLNPYFPGNPGAIKPGFTIDPTYTQ
ANMAPRPGVNLQPGFITVKWRALAGGQRTNESQNDQSRLLASLDGTVAGWDYQLGVSRNE
NKIKEIVSGYSDGDKIAIAMLNGLINPFGAQDAAGDKAIQDALLGGNLQNHRGKVTTADA
RVSRELGDWFKSGNNAAVAIGAEFRHEDFLSTANKEVAEKLVASTGVDPNSRSAGTRKVY
ALYSELNVPVTKQLDLTVALRYDKYSDFGSTTNPKFGLRFQPMKELLLRGSYSTGFRAPS
LYELNASQAYTNTGTVSDPVNCPGGVPIAGKSKSLNCNVQFQRLTGGNLDLKPEKAKNLT
FGVVYEPTSDVSLGVDFWWIKQKDSIAALAANTVLGPDFKTFAQYYKRNSKGDLSIDGFS
CPGSDCGYLDLRQQNLGGTNANGVDLSANWRLKLGSAGNVTLSLNSTYINTYEYQDYKDG
PWNQNVGVYVGVNPVFKWQHALAARWNFGVWTAGATAFYKSGYIDQDPSNTVKSYTTVDA
YVGVDVAKQFNLTFGIKNLFDRDPPYSNQDEVFQANYDPRFADPTGRKFYARASYKF
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacgtaaagccaccagcacggcagtgctgatcgtcatgggtgcgatggcatct
ttgccggccctcgcccaagaccgccttgagcgcgtcgagatcacgggctcggccatcaag
cgaatcgatgctgaaacctctgtgcccgtcaccatcgtgaagatggaggacctgaaggct
cagggtgtgaccagcgtcgagcaaatcatgtcctcgctcagtgccgtgcagatgacccag
tcgtccagccagcaagtgggctcgagtacgggcggggcatcctttgccaatctgcgcggc
attggctccaacaagacgctggtgctgctgaacggccgccgtatcgccaacaacgcgatc
gatggcgcggcacccgacctgaacatgatcccgtttgccgcgctggagcgcgtcgaagtg
ctgcgtgatggcgcgtcgtcgctgtacggcaccgacgccatcggcggtgtgatcaacttc
attacccgcaaggactaccgcggtggcgccatcacgattggcgtcgacaagccccagatg
gctggcggcgaggccagcaccgccaatgtgggcttcggctacggcgatctgtcctcgcaa
ggcttcaatatctttggcttcgtggacatcaccaagaccgatcctatcggtggtgaacag
cgccccttcaatcagcgcctcccgggcggtctgtcgcccacgcctttcccggccaactat
taccagaacggtgatgtgacggccaacccggctgctccgtcctgcacgagtccgtcctgg
atggtggacgccggtgacgggacctcctgctatatgtcgacctccaagttcgtcgactac
acgaccaagtcggatcgcaagtccgcgatgttgcgcggctcgctgcgcctggcccaggat
cacaccctgtcggtggaatggttcaccaccagcaacgactcgatctcccgcattgctccg
gtgccctatggcacgctgtggatgaacccccgccgcccggacggttcgctgaatccttac
ttcccgggtaatcctggcgccatcaagcctggcttcaccatcgacccgacgtacacgcag
gccaatatggctccgcgtccgggcgtgaacctgcagccaggtttcatcacggtgaagtgg
cgtgccctggctggtggtcagcggaccaatgagtcgcagaacgaccagagccgcctgctg
gcttcgctggacggtacggtggcgggctgggattaccagctcggcgtgagccgcaatgaa
aacaagatcaaggagatcgtcagcggctactccgacggcgacaagattgccatcgccatg
ctcaatggtctgatcaacccctttggcgcgcaggacgctgctggcgacaaggccattcag
gacgcgctgctgggcggcaatctgcagaatcatcgcggcaaggtgactacggccgacgcg
cgtgtcagccgtgagctgggcgactggttcaagtcgggcaataacgcggcggtggccatc
ggtgccgagttccgtcatgaagacttcctgtccaccgccaacaaggaggtggccgagaag
ctggtggccagcaccggtgtggaccccaattcccgctcggcgggcacccgcaaggtctac
gcgctctattccgagctgaacgtgccggtgaccaagcagctggacctcaccgtggccctg
cgctatgacaagtacagcgacttcggcagcaccaccaacccgaagttcggcctgcgcttc
cagccgatgaaggaactgctgctgcgcggcagctactccaccgggttccgcgctccttcg
ctctatgagctgaacgcctcgcaggcctacaccaacaccggtaccgtgtccgacccggtg
aactgcccgggcggcgtgccgattgccgggaagtccaagtccctgaactgcaatgtgcaa
ttccagcgcctgaccggcggcaatttggacctcaagcccgagaaggcgaagaacctgacc
ttcggtgtggtctacgagccgacttcggacgtttccctgggtgtggacttctggtggatc
aagcagaaggactcgattgcggccctggcagccaataccgtgctgggcccggacttcaag
acttttgcccagtactacaagcgcaactccaagggcgatctgtccattgacggcttctcc
tgccccggcagcgattgcggctatctggatctgcgccagcagaacctgggcggcaccaat
gccaacggtgtggatctgagcgccaactggcgcctgaagctgggctcggccggcaacgtg
accttgtcgctcaacagcacctacatcaacacctacgagtaccaggactacaaggacggt
ccgtggaaccagaatgtgggcgtgtatgtgggcgtcaacccggtgttcaagtggcagcat
gccctggctgcccgctggaatttcggtgtctggactgcaggtgccaccgccttctacaag
agcggctacatcgaccaggatcccagcaataccgtcaagtcctacaccacggttgatgcc
tatgtgggcgtcgatgtggccaagcagttcaacctgacctttggtatcaagaacctgttt
gaccgcgatccgccgtattccaaccaggatgaggtgttccaggcgaactacgacccgcgc
tttgccgaccccacgggtcgcaagttctacgcgcgcgcttcctacaagttctga
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