Shinella sp. XGS7: LHJ69_02470
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Entry
LHJ69_02470 CDS
T10581
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shin Shinella sp. XGS7
Pathway
shin00061
Fatty acid biosynthesis
shin00071
Fatty acid degradation
shin01100
Metabolic pathways
shin01212
Fatty acid metabolism
shin02024
Quorum sensing
shin04146
Peroxisome
Module
shin_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LHJ69_02470
00071 Fatty acid degradation
LHJ69_02470
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LHJ69_02470
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHJ69_02470
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shin01004
]
LHJ69_02470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shin04147
]
LHJ69_02470
Enzymes [BR:
shin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LHJ69_02470
Lipid biosynthesis proteins [BR:
shin01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LHJ69_02470
Exosome [BR:
shin04147
]
Exosomal proteins
Exosomal proteins of breast milk
LHJ69_02470
Exosomal proteins of breast cancer cells
LHJ69_02470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UDF35955
LinkDB
All DBs
Position
complement(552564..554234)
Genome browser
AA seq
556 aa
AA seq
DB search
MEKIWLKNYPAGVPADINAELYPSLVALMEGAFKKYPQQPAYKMLGRSITFAQIDEASRA
IAAWLQARGLEKGDRVAVMMPNILQNPVIIFGILRAGLVVVNVNPLYTPRELEHQLKDAG
AKALFVLENFAGTVAQVVARTAVKHVVVTTMGDMLGLKGLIVNFVVRKVKKLVPAWSLPG
AVRFNDAVAQGRGLSYTSPKVGPGDIAVLQYTGGTTGVSKGAVLLHRNLVANTLQAEAWY
QPALRKIPQGEQLMSVCALPLYHIFGFTTNMMLSMHVGGCNILIPNPRDLPAVFKELSKH
RFHSLPAVNTLFLAMANHAEFSTVDWSGLVISVGGGMAVQRPVAERWQKMTGCAITEGYG
LSETSPVATANRFDKPEFTGTIGLPLPSTDIEIRDDEGRTLALGEVGEICIRGPQVMAGY
WQRPDETAKVMTPDGFFRSGDIGFMTAEGYTKIVDRKKDMILVSGFNVFPNEVEDVITQM
PGVLEAAAVGVPDAKAGEAVKLVIVKKDPALDEAQVRAFCEANLTGYKRPKIVEFRTELP
KTPVGKILRRELRDKK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatctggctgaagaactaccccgctggcgtgccggcggacatcaacgcggag
ctgtacccctcgttggtggccctgatggagggggcgttcaagaagtacccgcagcagccc
gcctacaagatgctgggccgctccatcacctttgcgcagatcgatgaggcctcgcgcgcc
atcgccgcctggctccaggcacgggggctggaaaagggcgaccgcgtcgcggtcatgatg
ccgaacatcctgcagaacccggtgatcatcttcggcatcctgcgcgccgggctcgtcgtg
gtgaacgtcaacccgctctatacgccgcgcgaactcgaacaccagctgaaggatgccggc
gccaaggcgctgttcgttctggagaattttgccggcacggtggcgcaggtcgtcgcgcgc
accgccgtcaagcatgtcgtcgtcaccacgatgggcgacatgctgggtctcaagggcctg
atcgtcaatttcgtcgtgcgcaaggtcaagaagctcgtgccggcctggtcgctgcccggc
gccgtgcgcttcaatgacgccgtggcccagggccgcggcctgtcctacacctcgcccaag
gtgggcccgggcgatatcgcggtgctgcagtacaccggcggcaccaccggcgtgtccaag
ggtgcggtgctgctgcaccgcaatctggtggccaacaccctgcaggccgaggcctggtac
cagccggcgctcaggaagatcccgcagggcgagcagctgatgagcgtttgcgccctgccg
ctgtatcacatcttcggcttcaccacgaacatgatgctgtccatgcatgtgggcggctgc
aacatcctgatccccaacccgcgcgatctgcccgcggtgttcaaggaactgtccaagcac
cgcttccacagcctgccggcggtcaacaccctgttcctggccatggccaaccatgccgag
ttcagcaccgtggactggagcggtctggtgatctcggtggggggcggcatggcggtgcag
cgcccggtcgctgaacgctggcagaagatgacgggctgcgccatcaccgaaggctacggc
ctttcggagacctcgccggtcgccaccgccaaccgtttcgacaagccggaattcaccggc
acgatcggcctgccgctgccctccaccgatatcgagatccgcgacgacgagggccgtacg
ctggcgctcggcgaggtcggcgagatctgcatccgcggtccgcaggtcatggccggctac
tggcagcgcccggacgagacggccaaggtaatgacgcccgacggcttcttccgctccggc
gacattggcttcatgacggccgaaggctacaccaagatcgtcgaccgcaagaaggacatg
atcctcgtctccggcttcaacgtcttccccaacgaggtcgaggacgtgatcacccagatg
cccggcgtgctggaagccgcggccgtgggcgtgcccgatgccaaggcgggcgaggcggtc
aagctggtcatcgtcaagaaagacccagccctggacgaggcccaggtgcgcgccttctgc
gaggccaatctgaccggctacaagcggcccaagatcgtggagttccgcaccgagctgccc
aagaccccggtgggcaagatcctgcggcgtgaactccgcgacaaaaaataa
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