Shinella sp. XGS7: LHJ69_03100
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Entry
LHJ69_03100 CDS
T10581
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
shin Shinella sp. XGS7
Pathway
shin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHJ69_03100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_03100
Transporters [BR:
shin02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LHJ69_03100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UDF36069
LinkDB
All DBs
Position
complement(697689..699557)
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AA seq
622 aa
AA seq
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MSLWPRAARRIPLTPWIAGAACALGLLGAAQAQQNTPASAAAHAPAPKVFRYAFIIAETG
FDPAQISDLYSRIITGHIFDGLYKYDHLARPFKVKPNVALGMPEVSEDYRTWTIKIRPGI
FYAPDEAFKGRKRELVAEDFVYALKRFFDPATKSPAYSYFNDATILGLDELRQEALRSKK
PFDYDKPVEGLRALDRYTIQYRLKEPRPRFIYSLAGGDQYGAVAREVMEHYAGRTMEHPV
GTGPFMLTKWRRSSQMVLERNPNFRELYYDAEPNADDAEGQALLARLKGRRLPMVDRVEV
SVIEESQPRWLSFLNREIDYISVPLEFSNVAAPNGRLAPNLAKQGIHMDRLVNPDRTLYY
FNMEDPLVGGYTPEKVALRRAIGLGTDTQREVNTVRRGQAVVAQSLVSPSTWGYEPDYKT
ENGDYDLARARALLDLYGYKDVDGDGWRETPEGKPLVIEYASQPDALSRAFDELWKRNMD
NLGLRLKIKAGKWPEQLKAARAGQLMIWQLGYSASTPDTQPGLEILYGPTSGGQNLGRFK
HKRFDEIYEEMQRLPDGPERMGLLREAQKIITAYMPQKYLVHRIVTDLSQPWVIGYKRPL
FGNQFWQYIDVDMDLRRARMGS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtggccccgcgcagcccgccgcatccccctgaccccctggatagccggcgcc
gcctgtgcgctgggcctgctcggagcggcccaggctcagcagaacacgccggccagcgcc
gcggcccatgcgcccgcgcccaaggtcttccgctacgccttcatcattgccgagaccggc
ttcgacccggcccagatcagcgatctgtactcgcgcatcatcacgggccacatcttcgac
gggctctacaagtacgaccatctggcccggcccttcaaggtcaagcccaatgtggccctg
ggcatgcccgaggtcagcgaggactaccggacctggaccatcaagatccgccccggcatc
ttctacgcgccggacgaggccttcaagggcaggaagcgtgagctggtggccgaggacttc
gtctacgcactcaagcgcttcttcgatccggccaccaagagcccggcctactcctacttc
aacgacgccaccatcctgggcctggacgagctgcgccaggaagcgctcaggagcaagaag
cccttcgattacgacaagcccgtcgagggcctgcgcgctctggaccgctacaccatccag
taccgcctgaaggaacctcggccgcgtttcatctacagcctggccggtggcgaccagtac
ggcgccgtggcccgcgaggtgatggagcactatgccggccgcaccatggagcatccggtg
ggcaccggccccttcatgctcaccaagtggcgccgcagctcgcagatggtgctggagcgc
aaccccaatttccgcgagctctattacgacgccgagcccaatgccgatgatgccgagggc
caggccttgctggcccggctcaagggccgccgcctgcccatggtggaccgggtggaggtc
tcggtcatcgaggagagccagccgcgctggctgtccttcctgaaccgcgagatcgactac
atcagcgtgcccctggagttctcgaatgtggccgccccgaatggccggctggcgcccaat
ctggccaagcagggcatccatatggaccgcctggtcaaccccgaccgcacgctctactac
ttcaatatggaagatccgctggtcggcggctacacgcccgagaaggtggcgctgcgccgc
gccatcggcctgggcaccgacacccagcgcgaggtcaacaccgtgcgccgcggccaggcc
gtggtggcccagtccctggtctcgcccagcacctggggctacgagcccgactacaagacc
gagaacggcgactacgacctggcccgcgcccgcgccctgctggacctgtacggctacaag
gacgtggacggcgacggctggcgcgagacgcccgagggcaagcccctggtgatcgagtac
gccagccagcccgacgccctctcgcgcgccttcgacgagctgtggaagcgcaatatggac
aatctgggcctgcgcctcaagatcaaggccggcaaatggcccgagcagctcaaggccgcg
cgcgccggccagctgatgatctggcagctgggctacagcgcctccacccccgatacccag
cccggcctggaaatcctctacgggcccacctcgggcggccagaacctgggccgcttcaag
cacaagcgcttcgacgagatctacgaggaaatgcagcgcctgcccgatggcccggagcgc
atgggcctgctgcgcgaggcgcagaagatcatcaccgcctacatgccccagaagtacctg
gtgcaccgcatcgtcacggacctgagccagccctgggtgatcggctacaagcgcccgctc
ttcggcaaccagttctggcagtacatcgacgtggacatggacctgcgccgcgcgcgcatg
ggctcctga
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