Shinella sp. XGS7: LHJ69_03575
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Entry
LHJ69_03575 CDS
T10581
Name
(GenBank) PAS domain S-box protein
KO
K11711
two-component system, LuxR family, sensor histidine kinase DctS [EC:
2.7.13.3
]
Organism
shin Shinella sp. XGS7
Pathway
shin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LHJ69_03575
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
shin01001
]
LHJ69_03575
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shin02022
]
LHJ69_03575
Enzymes [BR:
shin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LHJ69_03575
Protein kinases [BR:
shin01001
]
Histidine kinases
LuxR family [OT]
LHJ69_03575
Two-component system [BR:
shin02022
]
LuxR family
DctS-DctR (C4-dicarboxylate transport)
LHJ69_03575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_9
HisKA
PAS_4
PAS_8
Motif
Other DBs
NCBI-ProteinID:
UDF36163
LinkDB
All DBs
Position
complement(800211..802367)
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AA seq
718 aa
AA seq
DB search
MDAPLTELSPPPPPPSPPVLRGWRRWRRALLWGALVALLLVAQTLLVLLTLSYEASKAQE
QVDLAAAEVAARAKQLAGRDLQGLQALLWQNVQDPRWRDDAAELLRRTRPLLRLELRDEH
REVLEAVNSPYTAPLFTQIGRDQLQLETELACAAALRHGSQLYSRSYFVPLPGGEGLEVM
DLCLPQLRAGEVAAFLVATVGLRQLLEESVSRDLARSNEMSFVEGDGTRLARTGLTRGAG
VYIAERVVDLPGLTLQLRADSATGQPKLIPNLATALVMGLSLALFAVVLLLARDGRRRAF
AEHALAESLSFRQAMENSLITGLRARDMEGRITYVNPAFCKLVGFEREELLGRGAPPQAP
PYWPPEHVDEYWRRHGSRVERWEAGQERQGFETVFMRRSGERFPVMIYEAPLVSAQGQQT
GWMSAVLDVSGQRKMEELSRQQQERLQATARLATVGEMASLLSHELNQPLAAIASYATAS
LNLMTREAEDPQTPAMVRQAVTRIAEQAERAGRVIKSVHDFVRRREQAREAIGADQVLDA
VLPLVRLQARKSGARIDLDLEQPAPRLRCDRTMVEQVLLNLTRNGIQAMDPATPLAERVL
LLRVRRAGPRWVSFAIIDRGPGIAPGVAKQLFTPFFTTRSEGMGLGLSLCRTVVEQHGGA
MDFSSPVAEGRGTEFRFTLPADNPASGAASGRAPSPIPQETDPHATDNGQAADGVPRR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggatgccccgctgaccgaactttcacccccgccgcctccgccctcgccgcccgtgctg
cggggctggcggcgctggcgccgcgccctgctgtggggcgccctcgtggccctgctgctg
gtggcccagaccctgctcgtgctgctgaccctgagctacgaggcctccaaggcccaggag
caggtggacctggccgcggccgaggtggcggcgcgcgccaagcagctggccggccgcgat
ctgcagggcctgcaggccctgctctggcagaacgtgcaggacccgcgctggcgcgacgac
gccgccgagctgctgcgccgcacccgccccctgctgcgcctggaactgcgcgacgagcac
cgcgaggtgctggaggccgtcaactcgccctacaccgcgccgcttttcacccagatcggg
cgcgaccagctgcagctggaaaccgagctggcctgtgccgcggccctgcgccacggctcc
cagctctactcgcgcagctatttcgtgcccctgcccgggggcgagggcctggaggtcatg
gacctgtgcctgccccagctgcgtgccggcgaggtggcggcctttctggtggccacggtg
ggcctgcgccagctgctggaggaatcggtctcgcgcgatctggcgcgcagcaacgagatg
tcctttgtggagggcgatggcacccgcctggcccgcaccggcctgacccgcggcgctggc
gtctacatcgccgagcgcgtggtggacctgccgggcctgaccctgcagctgcgcgcggac
agcgccaccggccagcccaagctgatccccaatctggccacggccctggtcatgggcctg
tcgctggcgctgtttgccgtggtgctgctgctggcgcgcgacggccgccgccgcgccttt
gccgagcatgcgctggccgagtcgctgagttttcgccaggccatggagaactccctgatc
acgggcctgcgcgcccgcgatatggaaggccgcatcacctatgtgaacccggccttctgc
aagctggtgggtttcgagcgcgaggagctgctgggccgtggcgccccgccccaggccccg
ccctattggccgcccgagcatgtggacgagtactggcgccgccatggcagccgggtcgaa
cgctgggaggccggccaggagcgccagggcttcgagaccgtgttcatgcgccgcagcggc
gagcgcttcccggtgatgatctacgaggcccccctggtcagcgcccagggccagcagacc
ggctggatgagcgcggtgctggatgtgagcggccagcgcaagatggaggagctctcgcgc
cagcagcaggagcgcctgcaggccacggcccgcctggccaccgtcggcgagatggcctcc
ctgctcagccacgagctcaaccagcccctggccgccatcgccagctacgccaccgcctcg
ctgaacctgatgacgcgcgaggccgaggacccgcagaccccggccatggtgcgccaggcc
gtgacccgcatcgccgagcaggccgagcgggccggccgcgtgatcaagagcgtgcatgac
ttcgtgcgccgccgcgagcaggcgcgcgaggccatcggcgccgaccaggtgctggacgcc
gtcctgcccctggtgcgcctgcaggcccgcaagagcggcgcgcgcatcgacctggacctg
gagcagcccgcgccgcgcctgcgctgcgaccgcaccatggtcgagcaggtgctgctcaac
ctcacgcgcaacggcatccaggccatggacccggccacgcccctggccgagcgcgtgctg
ctgctgcgtgtgcgccgtgccggcccgcgctgggtcagctttgccatcatcgaccgcggc
cccggcatcgcccccggcgtggccaagcagctcttcacgcccttcttcaccacccgcagc
gagggcatgggcctgggcctgagcctgtgccgcacggtggtggagcagcatggcggggcc
atggacttcagcagccccgtggccgaaggccgcggcaccgaattccgcttcaccctgccc
gcggataatccggccagcggcgccgcttccggccgcgcgcccagcccgattccgcaggag
acagacccgcatgcaacagacaacggtcaagctgccgatggtgtacctcgtcgatga
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