Shinella sp. XGS7: LHJ69_03815
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Entry
LHJ69_03815 CDS
T10581
Name
(GenBank) DEAD/DEAH box helicase
Organism
shin Shinella sp. XGS7
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
SWIM
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
UDF36208
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Position
855691..858507
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AA seq
938 aa
AA seq
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MSERPRLWPPEAEVLPRLFSAARLRRGRALQAELREVRADGEGASARLGAHELVLQGVAD
AQGEPRYSALCSCKTREFCEHAAALMLRLVDEADAPRREALLQTWVQALRRRASRAELQA
LPRLPEADAARLMDLLVHQEEAARSEPEPRPEPVLPPEPAGESGRFRPRLILQTLGRGEG
LLGLAPRGPIGPRGEQVSVAQVDWTYQLADGELLALPAPRRLLNSRPAARLNLGARWLQR
DLVAEAEARDQLWATELIPLEPELLQWRSPLAARGHEQLWTLAQEDFFADFFLEQLPRLR
EQGWLVEVRPGFAHRPQPATAWTLDIQPLGLARRQGSWLLSLGVEVDGENLDLAPLLADL
LRRDARWSNRAELARIPDEALIPLRAPGGRRVLAPAELLKSILGALVDLLDRREALEGGP
LPLSDWDGLRLATLDPRRWQFRGEGELRRLAERLLAAGSPPPVEPPAGLGLALRPYQRRG
LAWLQYLRAQGLGGILADEMGLGKTAQTLAHLLLEKEAGRLDCPALVVLPTSLLFNWQAE
AARVTPGLRVLTLHGAERHADLGRLGEFDLVLTSYALVWRDHEALAAQPWHLLILDEAQW
VKNASGRAAQALRRLRARHRLALTGTPLENHLGELWAQFDFLMPGFLGDERGFQRQWRKP
IEEGGETLRAELLARRVRPFILRRRKSEVATELPPLSEALRRVSLEGRQRELYESVRVAA
DIQVRRALAKQGLGAAQITVLDALLKLRQVCCDPRLLAGSPPEAGSAKLDLLMAMLPELL
AEGRRVLVFSQFTRLLDLVGAALKERGLGFETLSGRVSAARRAEIVARFQAEEQPLLLMS
LKAGGVGLNLTAADTVIHLDPWWNPAVQAQASARAHRIGQSKPVLVYKLVVEGSIEERML
ELQQRKEALAQGLLGSDPAEAAKFSEADLRVLLAPLGS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgcccccgcctctggcccccggaggccgaggtgctgccccggctcttcagc
gccgcgcgtctgcgccgcggccgggccctgcaggccgagctgcgcgaggtccgggccgac
ggggaaggcgccagcgcccgcctgggggcgcacgagctggtgctgcagggcgtggccgac
gcccagggcgagccgcgctacagcgccctgtgcagctgcaagacgcgcgagttctgcgag
catgccgccgccctgatgctgcgcctggtggacgaggccgacgcgccgcgccgcgaggcc
ctgctgcagacctgggtccaggccctgcgccggcgggccagccgcgccgagctgcaggcc
ctgccgcgcctgcccgaggccgatgccgcacggctgatggatctgctggtgcatcaggag
gaggccgcccggtcggagccggagccacggccagagcccgtgctcccgcccgagcccgca
ggcgagagcgggcgcttccgcccgcgcctgatcctgcagaccctgggccgcggcgagggc
ctgctgggcctggcgccccgcggccccatcggcccacgcggcgagcaggtcagcgtggcc
caggtggactggacctaccagctggccgatggcgagctgctcgccctgcccgcgccgcgc
cgcctgctcaacagccgcccggccgcccggctgaacctgggcgcgcgctggctgcagcgc
gatctggtggccgaggccgaggcccgcgaccagctctgggccaccgaactcatccccctg
gagcccgagctgctgcagtggcgcagccccctggcggcgcgtggccacgagcagctctgg
accctggcccaggaagacttctttgccgacttctttctggagcagctgccgcgcctgcgc
gagcagggctggctggtggaagtgcggccgggctttgcccaccggccgcagcccgccacg
gcctggaccctggacatccagcccctgggcctggcgcggcgccagggctcctggctgctc
agcctgggcgtggaggtggacggcgagaacctggacctggcgcccctgctggccgatctg
ctgcgccgcgatgcgcgctggagcaaccgggccgagctggcccgcatcccggacgaggcc
ctgatccccctgcgcgccccgggcgggcgccgggtgctggcgccggccgagctgctcaag
agcattctgggcgccctggtcgatctgctggaccggcgcgaggccctggaaggcggcccg
ctgccgctctcggactgggacggcctgcgcctggccaccctggacccgcggcgctggcag
ttccgcggcgagggcgagctgcgccgcctggccgagcgcctgctggcggccgggagcccg
ccgcccgtggaaccgcccgccggcctgggcctggccctgcgcccctaccagcggcgcggc
ctggcctggctgcaatacctgcgcgcccagggcctgggcggcatcctggccgacgagatg
ggcctgggcaagacggcccagaccctggcccatctgctgctcgaaaaagaggcaggccgc
ctggactgcccggccctggtggtgctgcccacctccctgctcttcaactggcaggccgag
gctgcgcgcgtgacgcccggtttgcgggtactcaccttgcacggcgccgaacgccatgcc
gacctgggccggctgggcgagtttgatctggtgctcaccagctatgccctggtctggcgc
gaccacgaagccctggcggcccagccctggcatctgctgatcctggacgaggcccagtgg
gtgaagaacgcgtcaggccgggccgcgcaggccttgcgccgcctgcgcgcccgccaccgc
ctggcgctgaccggcacgccgctggaaaaccatctgggcgagctctgggcccagttcgac
ttcctgatgcccggctttctgggcgatgagcgcggcttccagcgccagtggcgcaagccc
atcgaggagggcggcgagacgctgcgcgccgagctgctggcgcgccgggtgcggcccttc
atcctgcgccggcgcaagagcgaggtggccaccgagctgccgccgctgagcgaggccctg
cgccgggtgagcctggagggccggcagcgcgagctctatgagagcgtgcgcgtggcggcc
gatatccaggtgcggcgcgccctggccaagcagggcctgggcgcggcccagatcacggtg
ctggacgccctgctcaagctgcgccaggtctgctgcgacccgcgcctgctggccggcagc
ccgcccgaggccggcagcgccaagctggacctgctgatggccatgctgcccgagctgctg
gccgaggggcggcgggtcctggtgttctcgcagttcacgcgcctgctggatctggtgggc
gcggcattgaaggagcgcggcctgggcttcgagaccctgagcggccgggtgtcagcggcg
cggcgcgccgagatcgtggcccgcttccaggccgaggagcagcctctgctgctgatgagt
ctgaaggccggtggcgtgggcctgaacctcacggcggccgacaccgtgatccatctggac
ccctggtggaacccggccgtgcaggcccaggccagcgcacgggcgcaccgcatcggccag
agcaagccggtgctggtctacaagctggtggtggaaggcagcatcgaggagcggatgctg
gagctgcagcagcgcaaggaagcgctggcgcaaggcctgctgggcagcgacccggccgag
gcggccaagttcagcgaggcggatctgcgggtcctgctggcgcccttgggctcatag
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